Gene : Medtr7g080370 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11073:SF6 - CALRETICULIN-3 Description:  calreticulin
Genomic Order:  3576 Name:  ? Medtr7g080370
Secondary Identifier:  ? PAC:31084009
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g080370 0.5kb upstream 0.5kb upstream 5932 true chr7: 30560488-30566419 Medicago truncatula
Medtr7g080370 0.5kb upstream 0.5kb upstream 500 false chr7: 30565920-30566419 Medicago truncatula
Medtr7g080370 0.5kb downstream 0.5kb downstream 5932 true chr7: 30559988-30565919 Medicago truncatula
Medtr7g080370 0.5kb downstream 0.5kb downstream 500 false chr7: 30559988-30560487 Medicago truncatula
Medtr7g080370 1.0kb upstream 1.0kb upstream 6432 true chr7: 30560488-30566919 Medicago truncatula
Medtr7g080370 1.0kb upstream 1.0kb upstream 1000 false chr7: 30565920-30566919 Medicago truncatula
Medtr7g080370 1.0kb downstream 1.0kb downstream 6432 true chr7: 30559488-30565919 Medicago truncatula
Medtr7g080370 1.0kb downstream 1.0kb downstream 1000 false chr7: 30559488-30560487 Medicago truncatula
Medtr7g080370 2.0kb upstream 2.0kb upstream 7432 true chr7: 30560488-30567919 Medicago truncatula
Medtr7g080370 2.0kb upstream 2.0kb upstream 2000 false chr7: 30565920-30567919 Medicago truncatula
Medtr7g080370 2.0kb downstream 2.0kb downstream 7432 true chr7: 30558488-30565919 Medicago truncatula
Medtr7g080370 2.0kb downstream 2.0kb downstream 2000 false chr7: 30558488-30560487 Medicago truncatula
Medtr7g080370 5.0kb upstream 5.0kb upstream 10432 true chr7: 30560488-30570919 Medicago truncatula
Medtr7g080370 5.0kb upstream 5.0kb upstream 5000 false chr7: 30565920-30570919 Medicago truncatula
Medtr7g080370 5.0kb downstream 5.0kb downstream 10432 true chr7: 30555488-30565919 Medicago truncatula
Medtr7g080370 5.0kb downstream 5.0kb downstream 5000 false chr7: 30555488-30560487 Medicago truncatula
Medtr7g080370 10.0kb upstream 10.0kb upstream 15432 true chr7: 30560488-30575919 Medicago truncatula
Medtr7g080370 10.0kb upstream 10.0kb upstream 10000 false chr7: 30565920-30575919 Medicago truncatula
Medtr7g080370 10.0kb downstream 10.0kb downstream 15432 true chr7: 30550488-30565919 Medicago truncatula
Medtr7g080370 10.0kb downstream 10.0kb downstream 10000 false chr7: 30550488-30560487 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299224 5265 Fabidae View MSA
124065658 5270 Rosid View MSA
123739640 5271 Pentapetalae View MSA
122789782 5272 Eudicot View MSA
122048001 5273 Angiosperm View MSA
121351092 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.368        
cufflinks 12.829     High High
cufflinks 7.168        
cufflinks 1.096       Low
cufflinks 15.899     High High
cufflinks 2.127       Low
cufflinks 7.113        
cufflinks 7.821        
cufflinks 5.129        

0 Strain