Gene : Medtr7g080290 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23151:SF66 - BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE 1, CHLOROPLASTIC Description:  biotin carboxyl carrier acetyl-CoA carboxylase
Genomic Order:  3569 Name:  ? Medtr7g080290
Secondary Identifier:  ? PAC:31077852
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1264 Medicago truncatula pathologic  
Mtruncatula PWY-4381 Medicago truncatula pathologic  
Mtruncatula PWY-5156 Medicago truncatula pathologic  
Mtruncatula PWY-7388 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g080290 0.5kb upstream 0.5kb upstream 6345 true chr7: 30530313-30536657 Medicago truncatula
Medtr7g080290 0.5kb upstream 0.5kb upstream 500 false chr7: 30536158-30536657 Medicago truncatula
Medtr7g080290 0.5kb downstream 0.5kb downstream 6345 true chr7: 30529813-30536157 Medicago truncatula
Medtr7g080290 0.5kb downstream 0.5kb downstream 500 false chr7: 30529813-30530312 Medicago truncatula
Medtr7g080290 1.0kb upstream 1.0kb upstream 6845 true chr7: 30530313-30537157 Medicago truncatula
Medtr7g080290 1.0kb upstream 1.0kb upstream 1000 false chr7: 30536158-30537157 Medicago truncatula
Medtr7g080290 1.0kb downstream 1.0kb downstream 6845 true chr7: 30529313-30536157 Medicago truncatula
Medtr7g080290 1.0kb downstream 1.0kb downstream 1000 false chr7: 30529313-30530312 Medicago truncatula
Medtr7g080290 2.0kb upstream 2.0kb upstream 7845 true chr7: 30530313-30538157 Medicago truncatula
Medtr7g080290 2.0kb upstream 2.0kb upstream 2000 false chr7: 30536158-30538157 Medicago truncatula
Medtr7g080290 2.0kb downstream 2.0kb downstream 7845 true chr7: 30528313-30536157 Medicago truncatula
Medtr7g080290 2.0kb downstream 2.0kb downstream 2000 false chr7: 30528313-30530312 Medicago truncatula
Medtr7g080290 5.0kb upstream 5.0kb upstream 10845 true chr7: 30530313-30541157 Medicago truncatula
Medtr7g080290 5.0kb upstream 5.0kb upstream 5000 false chr7: 30536158-30541157 Medicago truncatula
Medtr7g080290 5.0kb downstream 5.0kb downstream 10845 true chr7: 30525313-30536157 Medicago truncatula
Medtr7g080290 5.0kb downstream 5.0kb downstream 5000 false chr7: 30525313-30530312 Medicago truncatula
Medtr7g080290 10.0kb upstream 10.0kb upstream 15845 true chr7: 30530313-30546157 Medicago truncatula
Medtr7g080290 10.0kb upstream 10.0kb upstream 10000 false chr7: 30536158-30546157 Medicago truncatula
Medtr7g080290 10.0kb downstream 10.0kb downstream 15845 true chr7: 30520313-30536157 Medicago truncatula
Medtr7g080290 10.0kb downstream 10.0kb downstream 10000 false chr7: 30520313-30530312 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311832 5265 Fabidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.56       Low
cufflinks 2.451        
cufflinks 2.076        
cufflinks 2.258        
cufflinks 3.84       High
cufflinks 0.79       Low
cufflinks 0.865        
cufflinks 2.125        
cufflinks 1.979        

0 Strain