Gene : Medtr7g081260 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG2401 - Predicted MutS-related protein involved in mismatch repair Description:  Smr (small MutS-related) domain protein
Genomic Order:  3647 Name:  ? Medtr7g081260
Secondary Identifier:  ? PAC:31079536
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g081260 0.5kb upstream 0.5kb upstream 6169 true chr7: 31001588-31007756 Medicago truncatula
Medtr7g081260 0.5kb upstream 0.5kb upstream 500 false chr7: 31001588-31002087 Medicago truncatula
Medtr7g081260 0.5kb downstream 0.5kb downstream 6169 true chr7: 31002088-31008256 Medicago truncatula
Medtr7g081260 0.5kb downstream 0.5kb downstream 500 false chr7: 31007757-31008256 Medicago truncatula
Medtr7g081260 1.0kb upstream 1.0kb upstream 6669 true chr7: 31001088-31007756 Medicago truncatula
Medtr7g081260 1.0kb upstream 1.0kb upstream 1000 false chr7: 31001088-31002087 Medicago truncatula
Medtr7g081260 1.0kb downstream 1.0kb downstream 6669 true chr7: 31002088-31008756 Medicago truncatula
Medtr7g081260 1.0kb downstream 1.0kb downstream 1000 false chr7: 31007757-31008756 Medicago truncatula
Medtr7g081260 2.0kb upstream 2.0kb upstream 7669 true chr7: 31000088-31007756 Medicago truncatula
Medtr7g081260 2.0kb upstream 2.0kb upstream 2000 false chr7: 31000088-31002087 Medicago truncatula
Medtr7g081260 2.0kb downstream 2.0kb downstream 7669 true chr7: 31002088-31009756 Medicago truncatula
Medtr7g081260 2.0kb downstream 2.0kb downstream 2000 false chr7: 31007757-31009756 Medicago truncatula
Medtr7g081260 5.0kb upstream 5.0kb upstream 10669 true chr7: 30997088-31007756 Medicago truncatula
Medtr7g081260 5.0kb upstream 5.0kb upstream 5000 false chr7: 30997088-31002087 Medicago truncatula
Medtr7g081260 5.0kb downstream 5.0kb downstream 10669 true chr7: 31002088-31012756 Medicago truncatula
Medtr7g081260 5.0kb downstream 5.0kb downstream 5000 false chr7: 31007757-31012756 Medicago truncatula
Medtr7g081260 10.0kb upstream 10.0kb upstream 15669 true chr7: 30992088-31007756 Medicago truncatula
Medtr7g081260 10.0kb upstream 10.0kb upstream 10000 false chr7: 30992088-31002087 Medicago truncatula
Medtr7g081260 10.0kb downstream 10.0kb downstream 15669 true chr7: 31002088-31017756 Medicago truncatula
Medtr7g081260 10.0kb downstream 10.0kb downstream 10000 false chr7: 31007757-31017756 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
122304355 5265 Fabidae View MSA
124066678 5270 Rosid View MSA
123738985 5271 Pentapetalae View MSA
122791579 5272 Eudicot View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.844        
cufflinks 3.268        
cufflinks 4.898       High
cufflinks 1.574       Low
cufflinks 2.755        
cufflinks 1.352       Low
cufflinks 2.746        
cufflinks 4.204       High
cufflinks 1.613       Low

0 Strain