Gene : Medtr6g093220 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13009//PTHR13009:SF5 - HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 Description:  activator of Hsp90 ATPase, amine-terminal protein
Genomic Order:  3870 Name:  ? Medtr6g093220
Secondary Identifier:  ? PAC:31102408
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g093220 0.5kb upstream 0.5kb upstream 4787 true chr6: 35214275-35219061 Medicago truncatula
Medtr6g093220 0.5kb upstream 0.5kb upstream 500 false chr6: 35218562-35219061 Medicago truncatula
Medtr6g093220 0.5kb downstream 0.5kb downstream 4787 true chr6: 35213775-35218561 Medicago truncatula
Medtr6g093220 0.5kb downstream 0.5kb downstream 500 false chr6: 35213775-35214274 Medicago truncatula
Medtr6g093220 1.0kb upstream 1.0kb upstream 5287 true chr6: 35214275-35219561 Medicago truncatula
Medtr6g093220 1.0kb upstream 1.0kb upstream 1000 false chr6: 35218562-35219561 Medicago truncatula
Medtr6g093220 1.0kb downstream 1.0kb downstream 5287 true chr6: 35213275-35218561 Medicago truncatula
Medtr6g093220 1.0kb downstream 1.0kb downstream 1000 false chr6: 35213275-35214274 Medicago truncatula
Medtr6g093220 2.0kb upstream 2.0kb upstream 6287 true chr6: 35214275-35220561 Medicago truncatula
Medtr6g093220 2.0kb upstream 2.0kb upstream 2000 false chr6: 35218562-35220561 Medicago truncatula
Medtr6g093220 2.0kb downstream 2.0kb downstream 6287 true chr6: 35212275-35218561 Medicago truncatula
Medtr6g093220 2.0kb downstream 2.0kb downstream 2000 false chr6: 35212275-35214274 Medicago truncatula
Medtr6g093220 5.0kb upstream 5.0kb upstream 9287 true chr6: 35214275-35223561 Medicago truncatula
Medtr6g093220 5.0kb upstream 5.0kb upstream 5000 false chr6: 35218562-35223561 Medicago truncatula
Medtr6g093220 5.0kb downstream 5.0kb downstream 9287 true chr6: 35209275-35218561 Medicago truncatula
Medtr6g093220 5.0kb downstream 5.0kb downstream 5000 false chr6: 35209275-35214274 Medicago truncatula
Medtr6g093220 10.0kb upstream 10.0kb upstream 14287 true chr6: 35214275-35228561 Medicago truncatula
Medtr6g093220 10.0kb upstream 10.0kb upstream 10000 false chr6: 35218562-35228561 Medicago truncatula
Medtr6g093220 10.0kb downstream 10.0kb downstream 14287 true chr6: 35204275-35218561 Medicago truncatula
Medtr6g093220 10.0kb downstream 10.0kb downstream 10000 false chr6: 35204275-35214274 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310716 5265 Fabidae View MSA
124062713 5270 Rosid View MSA
123737364 5271 Pentapetalae View MSA
122792093 5272 Eudicot View MSA
122042378 5273 Angiosperm View MSA
121347282 5274 Embryophyte View MSA
123426157 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.977       Low
cufflinks 5.897        
cufflinks 5.92        
cufflinks 3.737        
cufflinks 7.788        
cufflinks 3.321       Low
cufflinks 8.943       High
cufflinks 4.979        
cufflinks 9.034       High

0 Strain