Gene : Medtr6g445440 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31373:SF0 - EMB Description:  plant/T31B5-30 protein
Genomic Order:  1934 Name:  ? Medtr6g445440
Secondary Identifier:  ? PAC:31103792
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g445440 0.5kb upstream 0.5kb upstream 2526 true chr6: 15834149-15836674 Medicago truncatula
Medtr6g445440 0.5kb upstream 0.5kb upstream 500 false chr6: 15836175-15836674 Medicago truncatula
Medtr6g445440 0.5kb downstream 0.5kb downstream 2526 true chr6: 15833649-15836174 Medicago truncatula
Medtr6g445440 0.5kb downstream 0.5kb downstream 500 false chr6: 15833649-15834148 Medicago truncatula
Medtr6g445440 1.0kb upstream 1.0kb upstream 3026 true chr6: 15834149-15837174 Medicago truncatula
Medtr6g445440 1.0kb upstream 1.0kb upstream 1000 false chr6: 15836175-15837174 Medicago truncatula
Medtr6g445440 1.0kb downstream 1.0kb downstream 3026 true chr6: 15833149-15836174 Medicago truncatula
Medtr6g445440 1.0kb downstream 1.0kb downstream 1000 false chr6: 15833149-15834148 Medicago truncatula
Medtr6g445440 2.0kb upstream 2.0kb upstream 4026 true chr6: 15834149-15838174 Medicago truncatula
Medtr6g445440 2.0kb upstream 2.0kb upstream 2000 false chr6: 15836175-15838174 Medicago truncatula
Medtr6g445440 2.0kb downstream 2.0kb downstream 4026 true chr6: 15832149-15836174 Medicago truncatula
Medtr6g445440 2.0kb downstream 2.0kb downstream 2000 false chr6: 15832149-15834148 Medicago truncatula
Medtr6g445440 5.0kb upstream 5.0kb upstream 7026 true chr6: 15834149-15841174 Medicago truncatula
Medtr6g445440 5.0kb upstream 5.0kb upstream 5000 false chr6: 15836175-15841174 Medicago truncatula
Medtr6g445440 5.0kb downstream 5.0kb downstream 7026 true chr6: 15829149-15836174 Medicago truncatula
Medtr6g445440 5.0kb downstream 5.0kb downstream 5000 false chr6: 15829149-15834148 Medicago truncatula
Medtr6g445440 10.0kb upstream 10.0kb upstream 12026 true chr6: 15834149-15846174 Medicago truncatula
Medtr6g445440 10.0kb upstream 10.0kb upstream 10000 false chr6: 15836175-15846174 Medicago truncatula
Medtr6g445440 10.0kb downstream 10.0kb downstream 12026 true chr6: 15824149-15836174 Medicago truncatula
Medtr6g445440 10.0kb downstream 10.0kb downstream 10000 false chr6: 15824149-15834148 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041452 5273 Angiosperm View MSA
122310004 5265 Fabidae View MSA
124064904 5270 Rosid View MSA
123749450 5271 Pentapetalae View MSA
122797220 5272 Eudicot View MSA
121346363 5274 Embryophyte View MSA
123428550 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.07       Low
cufflinks 0.709        
cufflinks 0.99        
cufflinks 0.349        
cufflinks 1.108        
cufflinks 0.525        
cufflinks 0.447        
cufflinks 7.643       High
cufflinks 1.228        

0 Strain