Gene : Medtr6g445320 M. truncatula Mt4.0v1
Defline:  (1 of 34) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Description:  pentatricopeptide (PPR) repeat protein
Genomic Order:  1931 Name:  ? Medtr6g445320
Secondary Identifier:  ? PAC:31103361
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g445320 0.5kb upstream 0.5kb upstream 2303 true chr6: 15726667-15728969 Medicago truncatula
Medtr6g445320 0.5kb upstream 0.5kb upstream 500 false chr6: 15728470-15728969 Medicago truncatula
Medtr6g445320 0.5kb downstream 0.5kb downstream 2303 true chr6: 15726167-15728469 Medicago truncatula
Medtr6g445320 0.5kb downstream 0.5kb downstream 500 false chr6: 15726167-15726666 Medicago truncatula
Medtr6g445320 1.0kb upstream 1.0kb upstream 2803 true chr6: 15726667-15729469 Medicago truncatula
Medtr6g445320 1.0kb upstream 1.0kb upstream 1000 false chr6: 15728470-15729469 Medicago truncatula
Medtr6g445320 1.0kb downstream 1.0kb downstream 2803 true chr6: 15725667-15728469 Medicago truncatula
Medtr6g445320 1.0kb downstream 1.0kb downstream 1000 false chr6: 15725667-15726666 Medicago truncatula
Medtr6g445320 2.0kb upstream 2.0kb upstream 3803 true chr6: 15726667-15730469 Medicago truncatula
Medtr6g445320 2.0kb upstream 2.0kb upstream 2000 false chr6: 15728470-15730469 Medicago truncatula
Medtr6g445320 2.0kb downstream 2.0kb downstream 3803 true chr6: 15724667-15728469 Medicago truncatula
Medtr6g445320 2.0kb downstream 2.0kb downstream 2000 false chr6: 15724667-15726666 Medicago truncatula
Medtr6g445320 5.0kb upstream 5.0kb upstream 6803 true chr6: 15726667-15733469 Medicago truncatula
Medtr6g445320 5.0kb upstream 5.0kb upstream 5000 false chr6: 15728470-15733469 Medicago truncatula
Medtr6g445320 5.0kb downstream 5.0kb downstream 6803 true chr6: 15721667-15728469 Medicago truncatula
Medtr6g445320 5.0kb downstream 5.0kb downstream 5000 false chr6: 15721667-15726666 Medicago truncatula
Medtr6g445320 10.0kb upstream 10.0kb upstream 11803 true chr6: 15726667-15738469 Medicago truncatula
Medtr6g445320 10.0kb upstream 10.0kb upstream 10000 false chr6: 15728470-15738469 Medicago truncatula
Medtr6g445320 10.0kb downstream 10.0kb downstream 11803 true chr6: 15716667-15728469 Medicago truncatula
Medtr6g445320 10.0kb downstream 10.0kb downstream 10000 false chr6: 15716667-15726666 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313793 5265 Fabidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.446        
cufflinks 0.74        
cufflinks 0.681        
cufflinks 0.317        
cufflinks 1.252       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.395        
cufflinks 0.697        
cufflinks 0.171       Low

0 Strain