Gene : Medtr6g466320 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.1.1.140 - Sorbitol-6-phosphate 2-dehydrogenase / Ketosephosphate reductase Description:  sorbitol dehydrogenase-like protein
Genomic Order:  2626 Name:  ? Medtr6g466320
Secondary Identifier:  ? PAC:31104085
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-4101 Medicago truncatula pathologic  
Mtruncatula SORBDEG-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g466320 0.5kb upstream 0.5kb upstream 5774 true chr6: 23793281-23799054 Medicago truncatula
Medtr6g466320 0.5kb upstream 0.5kb upstream 500 false chr6: 23798555-23799054 Medicago truncatula
Medtr6g466320 0.5kb downstream 0.5kb downstream 5774 true chr6: 23792781-23798554 Medicago truncatula
Medtr6g466320 0.5kb downstream 0.5kb downstream 500 false chr6: 23792781-23793280 Medicago truncatula
Medtr6g466320 1.0kb upstream 1.0kb upstream 6274 true chr6: 23793281-23799554 Medicago truncatula
Medtr6g466320 1.0kb upstream 1.0kb upstream 1000 false chr6: 23798555-23799554 Medicago truncatula
Medtr6g466320 1.0kb downstream 1.0kb downstream 6274 true chr6: 23792281-23798554 Medicago truncatula
Medtr6g466320 1.0kb downstream 1.0kb downstream 1000 false chr6: 23792281-23793280 Medicago truncatula
Medtr6g466320 2.0kb upstream 2.0kb upstream 7274 true chr6: 23793281-23800554 Medicago truncatula
Medtr6g466320 2.0kb upstream 2.0kb upstream 2000 false chr6: 23798555-23800554 Medicago truncatula
Medtr6g466320 2.0kb downstream 2.0kb downstream 7274 true chr6: 23791281-23798554 Medicago truncatula
Medtr6g466320 2.0kb downstream 2.0kb downstream 2000 false chr6: 23791281-23793280 Medicago truncatula
Medtr6g466320 5.0kb upstream 5.0kb upstream 10274 true chr6: 23793281-23803554 Medicago truncatula
Medtr6g466320 5.0kb upstream 5.0kb upstream 5000 false chr6: 23798555-23803554 Medicago truncatula
Medtr6g466320 5.0kb downstream 5.0kb downstream 10274 true chr6: 23788281-23798554 Medicago truncatula
Medtr6g466320 5.0kb downstream 5.0kb downstream 5000 false chr6: 23788281-23793280 Medicago truncatula
Medtr6g466320 10.0kb upstream 10.0kb upstream 15274 true chr6: 23793281-23808554 Medicago truncatula
Medtr6g466320 10.0kb upstream 10.0kb upstream 10000 false chr6: 23798555-23808554 Medicago truncatula
Medtr6g466320 10.0kb downstream 10.0kb downstream 15274 true chr6: 23783281-23798554 Medicago truncatula
Medtr6g466320 10.0kb downstream 10.0kb downstream 10000 false chr6: 23783281-23793280 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302297 5265 Fabidae View MSA
124062823 5270 Rosid View MSA
123737718 5271 Pentapetalae View MSA
122797678 5272 Eudicot View MSA
122049435 5273 Angiosperm View MSA
121345697 5274 Embryophyte View MSA
123428625 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.054     Low  
cufflinks 0.258       High
cufflinks 0.255       High
cufflinks 0.052     Low  
cufflinks 0.195        
cufflinks 0.023     Low Low
cufflinks 0.037     Low  
cufflinks 0.233       High
cufflinks 0.038     Low  

0 Strain