Gene : Medtr6g488220 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  3624
Name:  ? Medtr6g488220 Secondary Identifier:  ? PAC:31103126
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g488220 0.5kb upstream 0.5kb upstream 2005 true chr6: 33237677-33239681 Medicago truncatula
Medtr6g488220 0.5kb upstream 0.5kb upstream 500 false chr6: 33239182-33239681 Medicago truncatula
Medtr6g488220 0.5kb downstream 0.5kb downstream 2005 true chr6: 33237177-33239181 Medicago truncatula
Medtr6g488220 0.5kb downstream 0.5kb downstream 500 false chr6: 33237177-33237676 Medicago truncatula
Medtr6g488220 1.0kb upstream 1.0kb upstream 2505 true chr6: 33237677-33240181 Medicago truncatula
Medtr6g488220 1.0kb upstream 1.0kb upstream 1000 false chr6: 33239182-33240181 Medicago truncatula
Medtr6g488220 1.0kb downstream 1.0kb downstream 2505 true chr6: 33236677-33239181 Medicago truncatula
Medtr6g488220 1.0kb downstream 1.0kb downstream 1000 false chr6: 33236677-33237676 Medicago truncatula
Medtr6g488220 2.0kb upstream 2.0kb upstream 3505 true chr6: 33237677-33241181 Medicago truncatula
Medtr6g488220 2.0kb upstream 2.0kb upstream 2000 false chr6: 33239182-33241181 Medicago truncatula
Medtr6g488220 2.0kb downstream 2.0kb downstream 3505 true chr6: 33235677-33239181 Medicago truncatula
Medtr6g488220 2.0kb downstream 2.0kb downstream 2000 false chr6: 33235677-33237676 Medicago truncatula
Medtr6g488220 5.0kb upstream 5.0kb upstream 6505 true chr6: 33237677-33244181 Medicago truncatula
Medtr6g488220 5.0kb upstream 5.0kb upstream 5000 false chr6: 33239182-33244181 Medicago truncatula
Medtr6g488220 5.0kb downstream 5.0kb downstream 6505 true chr6: 33232677-33239181 Medicago truncatula
Medtr6g488220 5.0kb downstream 5.0kb downstream 5000 false chr6: 33232677-33237676 Medicago truncatula
Medtr6g488220 10.0kb upstream 10.0kb upstream 11505 true chr6: 33237677-33249181 Medicago truncatula
Medtr6g488220 10.0kb upstream 10.0kb upstream 10000 false chr6: 33239182-33249181 Medicago truncatula
Medtr6g488220 10.0kb downstream 10.0kb downstream 11505 true chr6: 33227677-33239181 Medicago truncatula
Medtr6g488220 10.0kb downstream 10.0kb downstream 10000 false chr6: 33227677-33237676 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121654803 5273 Angiosperm View MSA
122294592 5265 Fabidae View MSA
124034459 5270 Rosid View MSA
123608094 5271 Pentapetalae View MSA
122642759 5272 Eudicot View MSA
120926906 5274 Embryophyte View MSA
122967555 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.955       Low
cufflinks 17.081     High  
cufflinks 31.558     High High
cufflinks 4.694        
cufflinks 21.381     High  
cufflinks 7.838        
cufflinks 6.942        
cufflinks 22.478     High  
cufflinks 4.476        

0 Strain