Gene : Medtr6g477980 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22891//PTHR22891:SF34 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C Description:  argonaute protein 1A
Genomic Order:  3078 Name:  ? Medtr6g477980
Secondary Identifier:  ? PAC:31101838
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g477980 0.5kb upstream 0.5kb upstream 9368 true chr6: 28759601-28768968 Medicago truncatula
Medtr6g477980 0.5kb upstream 0.5kb upstream 500 false chr6: 28759601-28760100 Medicago truncatula
Medtr6g477980 0.5kb downstream 0.5kb downstream 9368 true chr6: 28760101-28769468 Medicago truncatula
Medtr6g477980 0.5kb downstream 0.5kb downstream 500 false chr6: 28768969-28769468 Medicago truncatula
Medtr6g477980 1.0kb upstream 1.0kb upstream 9868 true chr6: 28759101-28768968 Medicago truncatula
Medtr6g477980 1.0kb upstream 1.0kb upstream 1000 false chr6: 28759101-28760100 Medicago truncatula
Medtr6g477980 1.0kb downstream 1.0kb downstream 9868 true chr6: 28760101-28769968 Medicago truncatula
Medtr6g477980 1.0kb downstream 1.0kb downstream 1000 false chr6: 28768969-28769968 Medicago truncatula
Medtr6g477980 2.0kb upstream 2.0kb upstream 10868 true chr6: 28758101-28768968 Medicago truncatula
Medtr6g477980 2.0kb upstream 2.0kb upstream 2000 false chr6: 28758101-28760100 Medicago truncatula
Medtr6g477980 2.0kb downstream 2.0kb downstream 10868 true chr6: 28760101-28770968 Medicago truncatula
Medtr6g477980 2.0kb downstream 2.0kb downstream 2000 false chr6: 28768969-28770968 Medicago truncatula
Medtr6g477980 5.0kb upstream 5.0kb upstream 13868 true chr6: 28755101-28768968 Medicago truncatula
Medtr6g477980 5.0kb upstream 5.0kb upstream 5000 false chr6: 28755101-28760100 Medicago truncatula
Medtr6g477980 5.0kb downstream 5.0kb downstream 13868 true chr6: 28760101-28773968 Medicago truncatula
Medtr6g477980 5.0kb downstream 5.0kb downstream 5000 false chr6: 28768969-28773968 Medicago truncatula
Medtr6g477980 10.0kb upstream 10.0kb upstream 18868 true chr6: 28750101-28768968 Medicago truncatula
Medtr6g477980 10.0kb upstream 10.0kb upstream 10000 false chr6: 28750101-28760100 Medicago truncatula
Medtr6g477980 10.0kb downstream 10.0kb downstream 18868 true chr6: 28760101-28778968 Medicago truncatula
Medtr6g477980 10.0kb downstream 10.0kb downstream 10000 false chr6: 28768969-28778968 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301658 5265 Fabidae View MSA
124062634 5270 Rosid View MSA
123738566 5271 Pentapetalae View MSA
122790150 5272 Eudicot View MSA
122045279 5273 Angiosperm View MSA
121345149 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.617     High  
cufflinks 10.591     High  
cufflinks 12.68     High  
cufflinks 12.281     High  
cufflinks 14.731     High  
cufflinks 4.91       Low
cufflinks 13.429     High  
cufflinks 10.775     High  
cufflinks 19.999     High High

0 Strain