Gene : Medtr6g478160 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21681 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 1 Description:  translation initiation factor eIF3 subunit
Genomic Order:  3111 Name:  ? Medtr6g478160
Secondary Identifier:  ? PAC:31102542
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g478160 0.5kb upstream 0.5kb upstream 5498 true chr6: 29036469-29041966 Medicago truncatula
Medtr6g478160 0.5kb upstream 0.5kb upstream 500 false chr6: 29041467-29041966 Medicago truncatula
Medtr6g478160 0.5kb downstream 0.5kb downstream 5498 true chr6: 29035969-29041466 Medicago truncatula
Medtr6g478160 0.5kb downstream 0.5kb downstream 500 false chr6: 29035969-29036468 Medicago truncatula
Medtr6g478160 1.0kb upstream 1.0kb upstream 5998 true chr6: 29036469-29042466 Medicago truncatula
Medtr6g478160 1.0kb upstream 1.0kb upstream 1000 false chr6: 29041467-29042466 Medicago truncatula
Medtr6g478160 1.0kb downstream 1.0kb downstream 5998 true chr6: 29035469-29041466 Medicago truncatula
Medtr6g478160 1.0kb downstream 1.0kb downstream 1000 false chr6: 29035469-29036468 Medicago truncatula
Medtr6g478160 2.0kb upstream 2.0kb upstream 6998 true chr6: 29036469-29043466 Medicago truncatula
Medtr6g478160 2.0kb upstream 2.0kb upstream 2000 false chr6: 29041467-29043466 Medicago truncatula
Medtr6g478160 2.0kb downstream 2.0kb downstream 6998 true chr6: 29034469-29041466 Medicago truncatula
Medtr6g478160 2.0kb downstream 2.0kb downstream 2000 false chr6: 29034469-29036468 Medicago truncatula
Medtr6g478160 5.0kb upstream 5.0kb upstream 9998 true chr6: 29036469-29046466 Medicago truncatula
Medtr6g478160 5.0kb upstream 5.0kb upstream 5000 false chr6: 29041467-29046466 Medicago truncatula
Medtr6g478160 5.0kb downstream 5.0kb downstream 9998 true chr6: 29031469-29041466 Medicago truncatula
Medtr6g478160 5.0kb downstream 5.0kb downstream 5000 false chr6: 29031469-29036468 Medicago truncatula
Medtr6g478160 10.0kb upstream 10.0kb upstream 14998 true chr6: 29036469-29051466 Medicago truncatula
Medtr6g478160 10.0kb upstream 10.0kb upstream 10000 false chr6: 29041467-29051466 Medicago truncatula
Medtr6g478160 10.0kb downstream 10.0kb downstream 14998 true chr6: 29026469-29041466 Medicago truncatula
Medtr6g478160 10.0kb downstream 10.0kb downstream 10000 false chr6: 29026469-29036468 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305517 5265 Fabidae View MSA
124062872 5270 Rosid View MSA
123745342 5271 Pentapetalae View MSA
122795526 5272 Eudicot View MSA
122043857 5273 Angiosperm View MSA
121344885 5274 Embryophyte View MSA
123424883 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.095     High  
cufflinks 10.791     High  
cufflinks 10.69     High  
cufflinks 7.859        
cufflinks 14.094     High High
cufflinks 5.723       Low
cufflinks 10.274     High  
cufflinks 10.582     High  
cufflinks 10.488     High  

0 Strain