Gene : Medtr6g478130 M. truncatula Mt4.0v1
Defline:  (1 of 599) PF13041 - PPR repeat family (PPR_2) Description:  pentatricopeptide (PPR) repeat protein
Genomic Order:  3099 Name:  ? Medtr6g478130
Secondary Identifier:  ? PAC:31103845
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g478130 0.5kb upstream 0.5kb upstream 2324 true chr6: 28926100-28928423 Medicago truncatula
Medtr6g478130 0.5kb upstream 0.5kb upstream 500 false chr6: 28927924-28928423 Medicago truncatula
Medtr6g478130 0.5kb downstream 0.5kb downstream 2324 true chr6: 28925600-28927923 Medicago truncatula
Medtr6g478130 0.5kb downstream 0.5kb downstream 500 false chr6: 28925600-28926099 Medicago truncatula
Medtr6g478130 1.0kb upstream 1.0kb upstream 2824 true chr6: 28926100-28928923 Medicago truncatula
Medtr6g478130 1.0kb upstream 1.0kb upstream 1000 false chr6: 28927924-28928923 Medicago truncatula
Medtr6g478130 1.0kb downstream 1.0kb downstream 2824 true chr6: 28925100-28927923 Medicago truncatula
Medtr6g478130 1.0kb downstream 1.0kb downstream 1000 false chr6: 28925100-28926099 Medicago truncatula
Medtr6g478130 2.0kb upstream 2.0kb upstream 3824 true chr6: 28926100-28929923 Medicago truncatula
Medtr6g478130 2.0kb upstream 2.0kb upstream 2000 false chr6: 28927924-28929923 Medicago truncatula
Medtr6g478130 2.0kb downstream 2.0kb downstream 3824 true chr6: 28924100-28927923 Medicago truncatula
Medtr6g478130 2.0kb downstream 2.0kb downstream 2000 false chr6: 28924100-28926099 Medicago truncatula
Medtr6g478130 5.0kb upstream 5.0kb upstream 6824 true chr6: 28926100-28932923 Medicago truncatula
Medtr6g478130 5.0kb upstream 5.0kb upstream 5000 false chr6: 28927924-28932923 Medicago truncatula
Medtr6g478130 5.0kb downstream 5.0kb downstream 6824 true chr6: 28921100-28927923 Medicago truncatula
Medtr6g478130 5.0kb downstream 5.0kb downstream 5000 false chr6: 28921100-28926099 Medicago truncatula
Medtr6g478130 10.0kb upstream 10.0kb upstream 11824 true chr6: 28926100-28937923 Medicago truncatula
Medtr6g478130 10.0kb upstream 10.0kb upstream 10000 false chr6: 28927924-28937923 Medicago truncatula
Medtr6g478130 10.0kb downstream 10.0kb downstream 11824 true chr6: 28916100-28927923 Medicago truncatula
Medtr6g478130 10.0kb downstream 10.0kb downstream 10000 false chr6: 28916100-28926099 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030818 5273 Angiosperm View MSA
122315359 5265 Fabidae View MSA
124040614 5270 Rosid View MSA
123755123 5271 Pentapetalae View MSA
122776425 5272 Eudicot View MSA
121299946 5274 Embryophyte View MSA
123337766 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain