Gene : Medtr7g027135 M. truncatula Mt4.0v1
Defline:  (1 of 10) 5.5.1.6 - Chalcone isomerase / Chalcone--flavanone isomerase Description:  chalcone-flavanone isomerase family protein
Genomic Order:  1133 Name:  ? Medtr7g027135
Secondary Identifier:  ? PAC:31078035
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY1F-FLAVSYN Medicago truncatula pathologic  
Mtruncatula PWY-2002 Medicago truncatula pathologic  
Mtruncatula PWY-5059 Medicago truncatula pathologic  
Mtruncatula PWY-6325 Medicago truncatula pathologic  
Mtruncatula PWY-6787 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g027135 0.5kb upstream 0.5kb upstream 2160 true chr7: 9179622-9181781 Medicago truncatula
Medtr7g027135 0.5kb upstream 0.5kb upstream 500 false chr7: 9181282-9181781 Medicago truncatula
Medtr7g027135 0.5kb downstream 0.5kb downstream 2160 true chr7: 9179122-9181281 Medicago truncatula
Medtr7g027135 0.5kb downstream 0.5kb downstream 500 false chr7: 9179122-9179621 Medicago truncatula
Medtr7g027135 1.0kb upstream 1.0kb upstream 2660 true chr7: 9179622-9182281 Medicago truncatula
Medtr7g027135 1.0kb upstream 1.0kb upstream 1000 false chr7: 9181282-9182281 Medicago truncatula
Medtr7g027135 1.0kb downstream 1.0kb downstream 2660 true chr7: 9178622-9181281 Medicago truncatula
Medtr7g027135 1.0kb downstream 1.0kb downstream 1000 false chr7: 9178622-9179621 Medicago truncatula
Medtr7g027135 2.0kb upstream 2.0kb upstream 3660 true chr7: 9179622-9183281 Medicago truncatula
Medtr7g027135 2.0kb upstream 2.0kb upstream 2000 false chr7: 9181282-9183281 Medicago truncatula
Medtr7g027135 2.0kb downstream 2.0kb downstream 3660 true chr7: 9177622-9181281 Medicago truncatula
Medtr7g027135 2.0kb downstream 2.0kb downstream 2000 false chr7: 9177622-9179621 Medicago truncatula
Medtr7g027135 5.0kb upstream 5.0kb upstream 6660 true chr7: 9179622-9186281 Medicago truncatula
Medtr7g027135 5.0kb upstream 5.0kb upstream 5000 false chr7: 9181282-9186281 Medicago truncatula
Medtr7g027135 5.0kb downstream 5.0kb downstream 6660 true chr7: 9174622-9181281 Medicago truncatula
Medtr7g027135 5.0kb downstream 5.0kb downstream 5000 false chr7: 9174622-9179621 Medicago truncatula
Medtr7g027135 10.0kb upstream 10.0kb upstream 11660 true chr7: 9179622-9191281 Medicago truncatula
Medtr7g027135 10.0kb upstream 10.0kb upstream 10000 false chr7: 9181282-9191281 Medicago truncatula
Medtr7g027135 10.0kb downstream 10.0kb downstream 11660 true chr7: 9169622-9181281 Medicago truncatula
Medtr7g027135 10.0kb downstream 10.0kb downstream 10000 false chr7: 9169622-9179621 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781374 5273 Angiosperm View MSA
122266637 5265 Fabidae Singleton cluster - no MSA
124051952 5270 Rosid View MSA
123749457 5271 Pentapetalae View MSA
122773155 5272 Eudicot View MSA
121052951 5274 Embryophyte View MSA
123092981 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.054     Low  

0 Strain