Gene : Medtr7g029515 M. truncatula Mt4.0v1
Defline:  (1 of 47) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Description:  PPR containing plant protein
Genomic Order:  1286 Name:  ? Medtr7g029515
Secondary Identifier:  ? PAC:31077286
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g029515 0.5kb upstream 0.5kb upstream 1955 true chr7: 10578580-10580534 Medicago truncatula
Medtr7g029515 0.5kb upstream 0.5kb upstream 500 false chr7: 10578580-10579079 Medicago truncatula
Medtr7g029515 0.5kb downstream 0.5kb downstream 1955 true chr7: 10579080-10581034 Medicago truncatula
Medtr7g029515 0.5kb downstream 0.5kb downstream 500 false chr7: 10580535-10581034 Medicago truncatula
Medtr7g029515 1.0kb upstream 1.0kb upstream 2455 true chr7: 10578080-10580534 Medicago truncatula
Medtr7g029515 1.0kb upstream 1.0kb upstream 1000 false chr7: 10578080-10579079 Medicago truncatula
Medtr7g029515 1.0kb downstream 1.0kb downstream 2455 true chr7: 10579080-10581534 Medicago truncatula
Medtr7g029515 1.0kb downstream 1.0kb downstream 1000 false chr7: 10580535-10581534 Medicago truncatula
Medtr7g029515 2.0kb upstream 2.0kb upstream 3455 true chr7: 10577080-10580534 Medicago truncatula
Medtr7g029515 2.0kb upstream 2.0kb upstream 2000 false chr7: 10577080-10579079 Medicago truncatula
Medtr7g029515 2.0kb downstream 2.0kb downstream 3455 true chr7: 10579080-10582534 Medicago truncatula
Medtr7g029515 2.0kb downstream 2.0kb downstream 2000 false chr7: 10580535-10582534 Medicago truncatula
Medtr7g029515 5.0kb upstream 5.0kb upstream 6455 true chr7: 10574080-10580534 Medicago truncatula
Medtr7g029515 5.0kb upstream 5.0kb upstream 5000 false chr7: 10574080-10579079 Medicago truncatula
Medtr7g029515 5.0kb downstream 5.0kb downstream 6455 true chr7: 10579080-10585534 Medicago truncatula
Medtr7g029515 5.0kb downstream 5.0kb downstream 5000 false chr7: 10580535-10585534 Medicago truncatula
Medtr7g029515 10.0kb upstream 10.0kb upstream 11455 true chr7: 10569080-10580534 Medicago truncatula
Medtr7g029515 10.0kb upstream 10.0kb upstream 10000 false chr7: 10569080-10579079 Medicago truncatula
Medtr7g029515 10.0kb downstream 10.0kb downstream 11455 true chr7: 10579080-10590534 Medicago truncatula
Medtr7g029515 10.0kb downstream 10.0kb downstream 10000 false chr7: 10580535-10590534 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309940 5265 Fabidae View MSA
124060677 5270 Rosid View MSA
123746655 5271 Pentapetalae View MSA
122793179 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.739        
cufflinks 1.024        
cufflinks 1.139        
cufflinks 0.095       Low
cufflinks 1.463       High
cufflinks 0.084     Low Low
cufflinks 0.559        
cufflinks 0.766        
cufflinks 0.317        

0 Strain