Gene : Medtr7g034585 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR15561 - CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN Description:  RNA polymerase II, Rpb4, core protein
Genomic Order:  1507 Name:  ? Medtr7g034585
Secondary Identifier:  ? PAC:31079178
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g034585 0.5kb upstream 0.5kb upstream 2666 true chr7: 13094424-13097089 Medicago truncatula
Medtr7g034585 0.5kb upstream 0.5kb upstream 500 false chr7: 13094424-13094923 Medicago truncatula
Medtr7g034585 0.5kb downstream 0.5kb downstream 2666 true chr7: 13094924-13097589 Medicago truncatula
Medtr7g034585 0.5kb downstream 0.5kb downstream 500 false chr7: 13097090-13097589 Medicago truncatula
Medtr7g034585 1.0kb upstream 1.0kb upstream 3166 true chr7: 13093924-13097089 Medicago truncatula
Medtr7g034585 1.0kb upstream 1.0kb upstream 1000 false chr7: 13093924-13094923 Medicago truncatula
Medtr7g034585 1.0kb downstream 1.0kb downstream 3166 true chr7: 13094924-13098089 Medicago truncatula
Medtr7g034585 1.0kb downstream 1.0kb downstream 1000 false chr7: 13097090-13098089 Medicago truncatula
Medtr7g034585 2.0kb upstream 2.0kb upstream 4166 true chr7: 13092924-13097089 Medicago truncatula
Medtr7g034585 2.0kb upstream 2.0kb upstream 2000 false chr7: 13092924-13094923 Medicago truncatula
Medtr7g034585 2.0kb downstream 2.0kb downstream 4166 true chr7: 13094924-13099089 Medicago truncatula
Medtr7g034585 2.0kb downstream 2.0kb downstream 2000 false chr7: 13097090-13099089 Medicago truncatula
Medtr7g034585 5.0kb upstream 5.0kb upstream 7166 true chr7: 13089924-13097089 Medicago truncatula
Medtr7g034585 5.0kb upstream 5.0kb upstream 5000 false chr7: 13089924-13094923 Medicago truncatula
Medtr7g034585 5.0kb downstream 5.0kb downstream 7166 true chr7: 13094924-13102089 Medicago truncatula
Medtr7g034585 5.0kb downstream 5.0kb downstream 5000 false chr7: 13097090-13102089 Medicago truncatula
Medtr7g034585 10.0kb upstream 10.0kb upstream 12166 true chr7: 13084924-13097089 Medicago truncatula
Medtr7g034585 10.0kb upstream 10.0kb upstream 10000 false chr7: 13084924-13094923 Medicago truncatula
Medtr7g034585 10.0kb downstream 10.0kb downstream 12166 true chr7: 13094924-13107089 Medicago truncatula
Medtr7g034585 10.0kb downstream 10.0kb downstream 10000 false chr7: 13097090-13107089 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305183 5265 Fabidae View MSA
124063506 5270 Rosid View MSA
123740278 5271 Pentapetalae View MSA
122796140 5272 Eudicot View MSA
122047210 5273 Angiosperm View MSA
121347420 5274 Embryophyte View MSA
123427400 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.89       High
cufflinks 2.605        
cufflinks 2.614        
cufflinks 1.992        
cufflinks 3.245        
cufflinks 1.186       Low
cufflinks 3.279        
cufflinks 2.473        
cufflinks 2.376        

0 Strain