Gene : Medtr7g033770 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR23321//PTHR23321:SF33 - RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR Description:  ribulose bisphosphate carboxylase large chain domain protein
Genomic Order:  1438 Name:  ? Medtr7g033770
Secondary Identifier:  ? PAC:31083846
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CALVIN-PWY Medicago truncatula pathologic  
Mtruncatula PHOTOALL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5723 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g033770 0.5kb upstream 0.5kb upstream 1079 true chr7: 12340590-12341668 Medicago truncatula
Medtr7g033770 0.5kb upstream 0.5kb upstream 500 false chr7: 12340590-12341089 Medicago truncatula
Medtr7g033770 0.5kb downstream 0.5kb downstream 1079 true chr7: 12341090-12342168 Medicago truncatula
Medtr7g033770 0.5kb downstream 0.5kb downstream 500 false chr7: 12341669-12342168 Medicago truncatula
Medtr7g033770 1.0kb upstream 1.0kb upstream 1579 true chr7: 12340090-12341668 Medicago truncatula
Medtr7g033770 1.0kb upstream 1.0kb upstream 1000 false chr7: 12340090-12341089 Medicago truncatula
Medtr7g033770 1.0kb downstream 1.0kb downstream 1579 true chr7: 12341090-12342668 Medicago truncatula
Medtr7g033770 1.0kb downstream 1.0kb downstream 1000 false chr7: 12341669-12342668 Medicago truncatula
Medtr7g033770 2.0kb upstream 2.0kb upstream 2579 true chr7: 12339090-12341668 Medicago truncatula
Medtr7g033770 2.0kb upstream 2.0kb upstream 2000 false chr7: 12339090-12341089 Medicago truncatula
Medtr7g033770 2.0kb downstream 2.0kb downstream 2579 true chr7: 12341090-12343668 Medicago truncatula
Medtr7g033770 2.0kb downstream 2.0kb downstream 2000 false chr7: 12341669-12343668 Medicago truncatula
Medtr7g033770 5.0kb upstream 5.0kb upstream 5579 true chr7: 12336090-12341668 Medicago truncatula
Medtr7g033770 5.0kb upstream 5.0kb upstream 5000 false chr7: 12336090-12341089 Medicago truncatula
Medtr7g033770 5.0kb downstream 5.0kb downstream 5579 true chr7: 12341090-12346668 Medicago truncatula
Medtr7g033770 5.0kb downstream 5.0kb downstream 5000 false chr7: 12341669-12346668 Medicago truncatula
Medtr7g033770 10.0kb upstream 10.0kb upstream 10579 true chr7: 12331090-12341668 Medicago truncatula
Medtr7g033770 10.0kb upstream 10.0kb upstream 10000 false chr7: 12331090-12341089 Medicago truncatula
Medtr7g033770 10.0kb downstream 10.0kb downstream 10579 true chr7: 12341090-12351668 Medicago truncatula
Medtr7g033770 10.0kb downstream 10.0kb downstream 10000 false chr7: 12341669-12351668 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311417 5265 Fabidae View MSA
124050800 5270 Rosid View MSA
123751247 5271 Pentapetalae View MSA
122773961 5272 Eudicot View MSA
122051023 5273 Angiosperm View MSA
121312251 5274 Embryophyte View MSA
123428195 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain