Gene : Medtr7g039320 M. truncatula Mt4.0v1
Defline:  (1 of 14) PF00176//PF00271 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) Description:  chromodomain helicase-DNA-binding-like protein
Genomic Order:  1610 Name:  ? Medtr7g039320
Secondary Identifier:  ? PAC:31078133
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g039320 0.5kb upstream 0.5kb upstream 8141 true chr7: 14592416-14600556 Medicago truncatula
Medtr7g039320 0.5kb upstream 0.5kb upstream 500 false chr7: 14592416-14592915 Medicago truncatula
Medtr7g039320 0.5kb downstream 0.5kb downstream 8141 true chr7: 14592916-14601056 Medicago truncatula
Medtr7g039320 0.5kb downstream 0.5kb downstream 500 false chr7: 14600557-14601056 Medicago truncatula
Medtr7g039320 1.0kb upstream 1.0kb upstream 8641 true chr7: 14591916-14600556 Medicago truncatula
Medtr7g039320 1.0kb upstream 1.0kb upstream 1000 false chr7: 14591916-14592915 Medicago truncatula
Medtr7g039320 1.0kb downstream 1.0kb downstream 8641 true chr7: 14592916-14601556 Medicago truncatula
Medtr7g039320 1.0kb downstream 1.0kb downstream 1000 false chr7: 14600557-14601556 Medicago truncatula
Medtr7g039320 2.0kb upstream 2.0kb upstream 9641 true chr7: 14590916-14600556 Medicago truncatula
Medtr7g039320 2.0kb upstream 2.0kb upstream 2000 false chr7: 14590916-14592915 Medicago truncatula
Medtr7g039320 2.0kb downstream 2.0kb downstream 9641 true chr7: 14592916-14602556 Medicago truncatula
Medtr7g039320 2.0kb downstream 2.0kb downstream 2000 false chr7: 14600557-14602556 Medicago truncatula
Medtr7g039320 5.0kb upstream 5.0kb upstream 12641 true chr7: 14587916-14600556 Medicago truncatula
Medtr7g039320 5.0kb upstream 5.0kb upstream 5000 false chr7: 14587916-14592915 Medicago truncatula
Medtr7g039320 5.0kb downstream 5.0kb downstream 12641 true chr7: 14592916-14605556 Medicago truncatula
Medtr7g039320 5.0kb downstream 5.0kb downstream 5000 false chr7: 14600557-14605556 Medicago truncatula
Medtr7g039320 10.0kb upstream 10.0kb upstream 17641 true chr7: 14582916-14600556 Medicago truncatula
Medtr7g039320 10.0kb upstream 10.0kb upstream 10000 false chr7: 14582916-14592915 Medicago truncatula
Medtr7g039320 10.0kb downstream 10.0kb downstream 17641 true chr7: 14592916-14610556 Medicago truncatula
Medtr7g039320 10.0kb downstream 10.0kb downstream 10000 false chr7: 14600557-14610556 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026277 5273 Angiosperm View MSA
122309224 5265 Fabidae View MSA
124063375 5270 Rosid View MSA
123740269 5271 Pentapetalae View MSA
122792604 5272 Eudicot View MSA
121347907 5274 Embryophyte View MSA
123380672 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.051     Low  
cufflinks 0.083        
cufflinks 0.115       High
cufflinks 0.022     Low  
cufflinks 0.119       High
cufflinks 0.022     Low  
cufflinks 0.018     Low Low
cufflinks 0.093        
cufflinks 0.025     Low  

0 Strain