Gene : Medtr7g017610 M. truncatula Mt4.0v1
Defline:  (1 of 43) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Description:  PPR containing plant-like protein
Genomic Order:  687 Name:  ? Medtr7g017610
Secondary Identifier:  ? PAC:31077863
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g017610 0.5kb upstream 0.5kb upstream 3961 true chr7: 5620341-5624301 Medicago truncatula
Medtr7g017610 0.5kb upstream 0.5kb upstream 500 false chr7: 5623802-5624301 Medicago truncatula
Medtr7g017610 0.5kb downstream 0.5kb downstream 3961 true chr7: 5619841-5623801 Medicago truncatula
Medtr7g017610 0.5kb downstream 0.5kb downstream 500 false chr7: 5619841-5620340 Medicago truncatula
Medtr7g017610 1.0kb upstream 1.0kb upstream 4461 true chr7: 5620341-5624801 Medicago truncatula
Medtr7g017610 1.0kb upstream 1.0kb upstream 1000 false chr7: 5623802-5624801 Medicago truncatula
Medtr7g017610 1.0kb downstream 1.0kb downstream 4461 true chr7: 5619341-5623801 Medicago truncatula
Medtr7g017610 1.0kb downstream 1.0kb downstream 1000 false chr7: 5619341-5620340 Medicago truncatula
Medtr7g017610 2.0kb upstream 2.0kb upstream 5461 true chr7: 5620341-5625801 Medicago truncatula
Medtr7g017610 2.0kb upstream 2.0kb upstream 2000 false chr7: 5623802-5625801 Medicago truncatula
Medtr7g017610 2.0kb downstream 2.0kb downstream 5461 true chr7: 5618341-5623801 Medicago truncatula
Medtr7g017610 2.0kb downstream 2.0kb downstream 2000 false chr7: 5618341-5620340 Medicago truncatula
Medtr7g017610 5.0kb upstream 5.0kb upstream 8461 true chr7: 5620341-5628801 Medicago truncatula
Medtr7g017610 5.0kb upstream 5.0kb upstream 5000 false chr7: 5623802-5628801 Medicago truncatula
Medtr7g017610 5.0kb downstream 5.0kb downstream 8461 true chr7: 5615341-5623801 Medicago truncatula
Medtr7g017610 5.0kb downstream 5.0kb downstream 5000 false chr7: 5615341-5620340 Medicago truncatula
Medtr7g017610 10.0kb upstream 10.0kb upstream 13461 true chr7: 5620341-5633801 Medicago truncatula
Medtr7g017610 10.0kb upstream 10.0kb upstream 10000 false chr7: 5623802-5633801 Medicago truncatula
Medtr7g017610 10.0kb downstream 10.0kb downstream 13461 true chr7: 5610341-5623801 Medicago truncatula
Medtr7g017610 10.0kb downstream 10.0kb downstream 10000 false chr7: 5610341-5620340 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310803 5265 Fabidae View MSA
124068109 5270 Rosid View MSA
123738299 5271 Pentapetalae View MSA
122788769 5272 Eudicot View MSA
122047238 5273 Angiosperm View MSA
121310712 5274 Embryophyte View MSA
123348130 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.079        
cufflinks 3.291        
cufflinks 3.843        
cufflinks 0.432       Low
cufflinks 3.105        
cufflinks 0.605       Low
cufflinks 1.423        
cufflinks 3.083        
cufflinks 0.757        

0 Strain