Gene : Medtr7g097190 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR33447:SF2 - PROTEIN PCS-1, ISOFORM A Description:  phytochelatin synthase
Genomic Order:  4780 Name:  ? Medtr7g097190
Secondary Identifier:  ? PAC:31084384
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6745 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g097190 0.5kb upstream 0.5kb upstream 5697 true chr7: 39091574-39097270 Medicago truncatula
Medtr7g097190 0.5kb upstream 0.5kb upstream 500 false chr7: 39091574-39092073 Medicago truncatula
Medtr7g097190 0.5kb downstream 0.5kb downstream 5697 true chr7: 39092074-39097770 Medicago truncatula
Medtr7g097190 0.5kb downstream 0.5kb downstream 500 false chr7: 39097271-39097770 Medicago truncatula
Medtr7g097190 1.0kb upstream 1.0kb upstream 6197 true chr7: 39091074-39097270 Medicago truncatula
Medtr7g097190 1.0kb upstream 1.0kb upstream 1000 false chr7: 39091074-39092073 Medicago truncatula
Medtr7g097190 1.0kb downstream 1.0kb downstream 6197 true chr7: 39092074-39098270 Medicago truncatula
Medtr7g097190 1.0kb downstream 1.0kb downstream 1000 false chr7: 39097271-39098270 Medicago truncatula
Medtr7g097190 2.0kb upstream 2.0kb upstream 7197 true chr7: 39090074-39097270 Medicago truncatula
Medtr7g097190 2.0kb upstream 2.0kb upstream 2000 false chr7: 39090074-39092073 Medicago truncatula
Medtr7g097190 2.0kb downstream 2.0kb downstream 7197 true chr7: 39092074-39099270 Medicago truncatula
Medtr7g097190 2.0kb downstream 2.0kb downstream 2000 false chr7: 39097271-39099270 Medicago truncatula
Medtr7g097190 5.0kb upstream 5.0kb upstream 10197 true chr7: 39087074-39097270 Medicago truncatula
Medtr7g097190 5.0kb upstream 5.0kb upstream 5000 false chr7: 39087074-39092073 Medicago truncatula
Medtr7g097190 5.0kb downstream 5.0kb downstream 10197 true chr7: 39092074-39102270 Medicago truncatula
Medtr7g097190 5.0kb downstream 5.0kb downstream 5000 false chr7: 39097271-39102270 Medicago truncatula
Medtr7g097190 10.0kb upstream 10.0kb upstream 15197 true chr7: 39082074-39097270 Medicago truncatula
Medtr7g097190 10.0kb upstream 10.0kb upstream 10000 false chr7: 39082074-39092073 Medicago truncatula
Medtr7g097190 10.0kb downstream 10.0kb downstream 15197 true chr7: 39092074-39107270 Medicago truncatula
Medtr7g097190 10.0kb downstream 10.0kb downstream 10000 false chr7: 39097271-39107270 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312285 5265 Fabidae View MSA
124068686 5270 Rosid View MSA
123741810 5271 Pentapetalae View MSA
122787952 5272 Eudicot View MSA
122042106 5273 Angiosperm View MSA
123429015 5275 Viridiplantae View MSA
121309923 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.772        
cufflinks 0.283       Low
cufflinks 2.099        
cufflinks 2.029        
cufflinks 1.51        
cufflinks 0.711        
cufflinks 2.842       High
cufflinks 0.757        
cufflinks 1.26        

0 Strain