Gene : Medtr7g020980 M. truncatula Mt4.0v1
Defline:  (1 of 209) PF00847 - AP2 domain (AP2) Description:  ethylene response factor
Genomic Order:  779 Name:  ? Medtr7g020980
Secondary Identifier:  ? PAC:31078250
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g020980 0.5kb upstream 0.5kb upstream 3587 true chr7: 6566078-6569664 Medicago truncatula
Medtr7g020980 0.5kb upstream 0.5kb upstream 500 false chr7: 6566078-6566577 Medicago truncatula
Medtr7g020980 0.5kb downstream 0.5kb downstream 3587 true chr7: 6566578-6570164 Medicago truncatula
Medtr7g020980 0.5kb downstream 0.5kb downstream 500 false chr7: 6569665-6570164 Medicago truncatula
Medtr7g020980 1.0kb upstream 1.0kb upstream 4087 true chr7: 6565578-6569664 Medicago truncatula
Medtr7g020980 1.0kb upstream 1.0kb upstream 1000 false chr7: 6565578-6566577 Medicago truncatula
Medtr7g020980 1.0kb downstream 1.0kb downstream 4087 true chr7: 6566578-6570664 Medicago truncatula
Medtr7g020980 1.0kb downstream 1.0kb downstream 1000 false chr7: 6569665-6570664 Medicago truncatula
Medtr7g020980 2.0kb upstream 2.0kb upstream 5087 true chr7: 6564578-6569664 Medicago truncatula
Medtr7g020980 2.0kb upstream 2.0kb upstream 2000 false chr7: 6564578-6566577 Medicago truncatula
Medtr7g020980 2.0kb downstream 2.0kb downstream 5087 true chr7: 6566578-6571664 Medicago truncatula
Medtr7g020980 2.0kb downstream 2.0kb downstream 2000 false chr7: 6569665-6571664 Medicago truncatula
Medtr7g020980 5.0kb upstream 5.0kb upstream 8087 true chr7: 6561578-6569664 Medicago truncatula
Medtr7g020980 5.0kb upstream 5.0kb upstream 5000 false chr7: 6561578-6566577 Medicago truncatula
Medtr7g020980 5.0kb downstream 5.0kb downstream 8087 true chr7: 6566578-6574664 Medicago truncatula
Medtr7g020980 5.0kb downstream 5.0kb downstream 5000 false chr7: 6569665-6574664 Medicago truncatula
Medtr7g020980 10.0kb upstream 10.0kb upstream 13087 true chr7: 6556578-6569664 Medicago truncatula
Medtr7g020980 10.0kb upstream 10.0kb upstream 10000 false chr7: 6556578-6566577 Medicago truncatula
Medtr7g020980 10.0kb downstream 10.0kb downstream 13087 true chr7: 6566578-6579664 Medicago truncatula
Medtr7g020980 10.0kb downstream 10.0kb downstream 10000 false chr7: 6569665-6579664 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308061 5265 Fabidae View MSA
124066336 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.242       Low
cufflinks 15.439     High  
cufflinks 29.275     High High
cufflinks 1.904        
cufflinks 19.859     High  
cufflinks 2.603        
cufflinks 7.19        
cufflinks 24.587     High  
cufflinks 1.06        

0 Strain