Gene : Medtr7g020800 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR14083 - YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEIN Description:  integral membrane HRF1 family protein
Genomic Order:  769 Name:  ? Medtr7g020800
Secondary Identifier:  ? PAC:31081913
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g020800 0.5kb upstream 0.5kb upstream 5200 true chr7: 6477197-6482396 Medicago truncatula
Medtr7g020800 0.5kb upstream 0.5kb upstream 500 false chr7: 6477197-6477696 Medicago truncatula
Medtr7g020800 0.5kb downstream 0.5kb downstream 5200 true chr7: 6477697-6482896 Medicago truncatula
Medtr7g020800 0.5kb downstream 0.5kb downstream 500 false chr7: 6482397-6482896 Medicago truncatula
Medtr7g020800 1.0kb upstream 1.0kb upstream 5700 true chr7: 6476697-6482396 Medicago truncatula
Medtr7g020800 1.0kb upstream 1.0kb upstream 1000 false chr7: 6476697-6477696 Medicago truncatula
Medtr7g020800 1.0kb downstream 1.0kb downstream 5700 true chr7: 6477697-6483396 Medicago truncatula
Medtr7g020800 1.0kb downstream 1.0kb downstream 1000 false chr7: 6482397-6483396 Medicago truncatula
Medtr7g020800 2.0kb upstream 2.0kb upstream 6700 true chr7: 6475697-6482396 Medicago truncatula
Medtr7g020800 2.0kb upstream 2.0kb upstream 2000 false chr7: 6475697-6477696 Medicago truncatula
Medtr7g020800 2.0kb downstream 2.0kb downstream 6700 true chr7: 6477697-6484396 Medicago truncatula
Medtr7g020800 2.0kb downstream 2.0kb downstream 2000 false chr7: 6482397-6484396 Medicago truncatula
Medtr7g020800 5.0kb upstream 5.0kb upstream 9700 true chr7: 6472697-6482396 Medicago truncatula
Medtr7g020800 5.0kb upstream 5.0kb upstream 5000 false chr7: 6472697-6477696 Medicago truncatula
Medtr7g020800 5.0kb downstream 5.0kb downstream 9700 true chr7: 6477697-6487396 Medicago truncatula
Medtr7g020800 5.0kb downstream 5.0kb downstream 5000 false chr7: 6482397-6487396 Medicago truncatula
Medtr7g020800 10.0kb upstream 10.0kb upstream 14700 true chr7: 6467697-6482396 Medicago truncatula
Medtr7g020800 10.0kb upstream 10.0kb upstream 10000 false chr7: 6467697-6477696 Medicago truncatula
Medtr7g020800 10.0kb downstream 10.0kb downstream 14700 true chr7: 6477697-6492396 Medicago truncatula
Medtr7g020800 10.0kb downstream 10.0kb downstream 10000 false chr7: 6482397-6492396 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314799 5265 Fabidae View MSA
124072986 5270 Rosid View MSA
123752428 5271 Pentapetalae View MSA
122785612 5272 Eudicot View MSA
122043920 5273 Angiosperm View MSA
121346017 5274 Embryophyte View MSA
123427563 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.048        
cufflinks 3.738        
cufflinks 2.847        
cufflinks 5.093       High
cufflinks 2.638       Low
cufflinks 2.401       Low
cufflinks 3.84        
cufflinks 2.857        
cufflinks 4.04        

0 Strain