Gene : Medtr7g022840 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31871:SF10 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K5K13 Description:  hypothetical protein
Genomic Order:  895 Name:  ? Medtr7g022840
Secondary Identifier:  ? PAC:31082371
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g022840 0.5kb upstream 0.5kb upstream 2897 true chr7: 7407373-7410269 Medicago truncatula
Medtr7g022840 0.5kb upstream 0.5kb upstream 500 false chr7: 7409770-7410269 Medicago truncatula
Medtr7g022840 0.5kb downstream 0.5kb downstream 2897 true chr7: 7406873-7409769 Medicago truncatula
Medtr7g022840 0.5kb downstream 0.5kb downstream 500 false chr7: 7406873-7407372 Medicago truncatula
Medtr7g022840 1.0kb upstream 1.0kb upstream 3397 true chr7: 7407373-7410769 Medicago truncatula
Medtr7g022840 1.0kb upstream 1.0kb upstream 1000 false chr7: 7409770-7410769 Medicago truncatula
Medtr7g022840 1.0kb downstream 1.0kb downstream 3397 true chr7: 7406373-7409769 Medicago truncatula
Medtr7g022840 1.0kb downstream 1.0kb downstream 1000 false chr7: 7406373-7407372 Medicago truncatula
Medtr7g022840 2.0kb upstream 2.0kb upstream 4397 true chr7: 7407373-7411769 Medicago truncatula
Medtr7g022840 2.0kb upstream 2.0kb upstream 2000 false chr7: 7409770-7411769 Medicago truncatula
Medtr7g022840 2.0kb downstream 2.0kb downstream 4397 true chr7: 7405373-7409769 Medicago truncatula
Medtr7g022840 2.0kb downstream 2.0kb downstream 2000 false chr7: 7405373-7407372 Medicago truncatula
Medtr7g022840 5.0kb upstream 5.0kb upstream 7397 true chr7: 7407373-7414769 Medicago truncatula
Medtr7g022840 5.0kb upstream 5.0kb upstream 5000 false chr7: 7409770-7414769 Medicago truncatula
Medtr7g022840 5.0kb downstream 5.0kb downstream 7397 true chr7: 7402373-7409769 Medicago truncatula
Medtr7g022840 5.0kb downstream 5.0kb downstream 5000 false chr7: 7402373-7407372 Medicago truncatula
Medtr7g022840 10.0kb upstream 10.0kb upstream 12397 true chr7: 7407373-7419769 Medicago truncatula
Medtr7g022840 10.0kb upstream 10.0kb upstream 10000 false chr7: 7409770-7419769 Medicago truncatula
Medtr7g022840 10.0kb downstream 10.0kb downstream 12397 true chr7: 7397373-7409769 Medicago truncatula
Medtr7g022840 10.0kb downstream 10.0kb downstream 10000 false chr7: 7397373-7407372 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314737 5265 Fabidae View MSA
124070789 5270 Rosid View MSA
123747492 5271 Pentapetalae View MSA
122795039 5272 Eudicot View MSA
122043868 5273 Angiosperm View MSA
121310203 5274 Embryophyte View MSA
123347760 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.07       Low
cufflinks 0.293        
cufflinks 0.673        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.135        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.58        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain