Gene : Medtr7g022190 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN Description:  transducin/WD40 repeat protein
Genomic Order:  856 Name:  ? Medtr7g022190
Secondary Identifier:  ? PAC:31082885
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g022190 0.5kb upstream 0.5kb upstream 6673 true chr7: 7099839-7106511 Medicago truncatula
Medtr7g022190 0.5kb upstream 0.5kb upstream 500 false chr7: 7106012-7106511 Medicago truncatula
Medtr7g022190 0.5kb downstream 0.5kb downstream 6673 true chr7: 7099339-7106011 Medicago truncatula
Medtr7g022190 0.5kb downstream 0.5kb downstream 500 false chr7: 7099339-7099838 Medicago truncatula
Medtr7g022190 1.0kb upstream 1.0kb upstream 7173 true chr7: 7099839-7107011 Medicago truncatula
Medtr7g022190 1.0kb upstream 1.0kb upstream 1000 false chr7: 7106012-7107011 Medicago truncatula
Medtr7g022190 1.0kb downstream 1.0kb downstream 7173 true chr7: 7098839-7106011 Medicago truncatula
Medtr7g022190 1.0kb downstream 1.0kb downstream 1000 false chr7: 7098839-7099838 Medicago truncatula
Medtr7g022190 2.0kb upstream 2.0kb upstream 8173 true chr7: 7099839-7108011 Medicago truncatula
Medtr7g022190 2.0kb upstream 2.0kb upstream 2000 false chr7: 7106012-7108011 Medicago truncatula
Medtr7g022190 2.0kb downstream 2.0kb downstream 8173 true chr7: 7097839-7106011 Medicago truncatula
Medtr7g022190 2.0kb downstream 2.0kb downstream 2000 false chr7: 7097839-7099838 Medicago truncatula
Medtr7g022190 5.0kb upstream 5.0kb upstream 11173 true chr7: 7099839-7111011 Medicago truncatula
Medtr7g022190 5.0kb upstream 5.0kb upstream 5000 false chr7: 7106012-7111011 Medicago truncatula
Medtr7g022190 5.0kb downstream 5.0kb downstream 11173 true chr7: 7094839-7106011 Medicago truncatula
Medtr7g022190 5.0kb downstream 5.0kb downstream 5000 false chr7: 7094839-7099838 Medicago truncatula
Medtr7g022190 10.0kb upstream 10.0kb upstream 16173 true chr7: 7099839-7116011 Medicago truncatula
Medtr7g022190 10.0kb upstream 10.0kb upstream 10000 false chr7: 7106012-7116011 Medicago truncatula
Medtr7g022190 10.0kb downstream 10.0kb downstream 16173 true chr7: 7089839-7106011 Medicago truncatula
Medtr7g022190 10.0kb downstream 10.0kb downstream 10000 false chr7: 7089839-7099838 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122306487 5265 Fabidae View MSA
124070552 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.366     High High
cufflinks 10.527     High  
cufflinks 14.057     High High
cufflinks 3.263       Low
cufflinks 10.605     High  
cufflinks 3.773       Low
cufflinks 5.096        
cufflinks 12.976     High  
cufflinks 4.172        

0 Strain