Gene : Medtr7g023540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12789 - DENSITY-REGULATED PROTEIN HOMOLOG Description:  translation initiation factor SUI1 family protein
Genomic Order:  921 Name:  ? Medtr7g023540
Secondary Identifier:  ? PAC:31077271
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g023540 0.5kb upstream 0.5kb upstream 3990 true chr7: 7670662-7674651 Medicago truncatula
Medtr7g023540 0.5kb upstream 0.5kb upstream 500 false chr7: 7670662-7671161 Medicago truncatula
Medtr7g023540 0.5kb downstream 0.5kb downstream 3990 true chr7: 7671162-7675151 Medicago truncatula
Medtr7g023540 0.5kb downstream 0.5kb downstream 500 false chr7: 7674652-7675151 Medicago truncatula
Medtr7g023540 1.0kb upstream 1.0kb upstream 4490 true chr7: 7670162-7674651 Medicago truncatula
Medtr7g023540 1.0kb upstream 1.0kb upstream 1000 false chr7: 7670162-7671161 Medicago truncatula
Medtr7g023540 1.0kb downstream 1.0kb downstream 4490 true chr7: 7671162-7675651 Medicago truncatula
Medtr7g023540 1.0kb downstream 1.0kb downstream 1000 false chr7: 7674652-7675651 Medicago truncatula
Medtr7g023540 2.0kb upstream 2.0kb upstream 5490 true chr7: 7669162-7674651 Medicago truncatula
Medtr7g023540 2.0kb upstream 2.0kb upstream 2000 false chr7: 7669162-7671161 Medicago truncatula
Medtr7g023540 2.0kb downstream 2.0kb downstream 5490 true chr7: 7671162-7676651 Medicago truncatula
Medtr7g023540 2.0kb downstream 2.0kb downstream 2000 false chr7: 7674652-7676651 Medicago truncatula
Medtr7g023540 5.0kb upstream 5.0kb upstream 8490 true chr7: 7666162-7674651 Medicago truncatula
Medtr7g023540 5.0kb upstream 5.0kb upstream 5000 false chr7: 7666162-7671161 Medicago truncatula
Medtr7g023540 5.0kb downstream 5.0kb downstream 8490 true chr7: 7671162-7679651 Medicago truncatula
Medtr7g023540 5.0kb downstream 5.0kb downstream 5000 false chr7: 7674652-7679651 Medicago truncatula
Medtr7g023540 10.0kb upstream 10.0kb upstream 13490 true chr7: 7661162-7674651 Medicago truncatula
Medtr7g023540 10.0kb upstream 10.0kb upstream 10000 false chr7: 7661162-7671161 Medicago truncatula
Medtr7g023540 10.0kb downstream 10.0kb downstream 13490 true chr7: 7671162-7684651 Medicago truncatula
Medtr7g023540 10.0kb downstream 10.0kb downstream 10000 false chr7: 7674652-7684651 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301489 5265 Fabidae View MSA
124070344 5270 Rosid View MSA
123750636 5271 Pentapetalae View MSA
122790029 5272 Eudicot View MSA
122051404 5273 Angiosperm View MSA
121346997 5274 Embryophyte View MSA
123423903 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.272        
cufflinks 6.792        
cufflinks 8.007        
cufflinks 6.777        
cufflinks 9.124        
cufflinks 4.457       Low
cufflinks 10.06     High High
cufflinks 6.377        
cufflinks 6.782        

0 Strain