Gene : Medtr7g025530 M. truncatula Mt4.0v1
Defline:  (1 of 492) PF01535 - PPR repeat (PPR) Description:  PPR repeat protein
Genomic Order:  1037 Name:  ? Medtr7g025530
Secondary Identifier:  ? PAC:31083567
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g025530 0.5kb upstream 0.5kb upstream 4863 true chr7: 8489677-8494539 Medicago truncatula
Medtr7g025530 0.5kb upstream 0.5kb upstream 500 false chr7: 8494040-8494539 Medicago truncatula
Medtr7g025530 0.5kb downstream 0.5kb downstream 4863 true chr7: 8489177-8494039 Medicago truncatula
Medtr7g025530 0.5kb downstream 0.5kb downstream 500 false chr7: 8489177-8489676 Medicago truncatula
Medtr7g025530 1.0kb upstream 1.0kb upstream 5363 true chr7: 8489677-8495039 Medicago truncatula
Medtr7g025530 1.0kb upstream 1.0kb upstream 1000 false chr7: 8494040-8495039 Medicago truncatula
Medtr7g025530 1.0kb downstream 1.0kb downstream 5363 true chr7: 8488677-8494039 Medicago truncatula
Medtr7g025530 1.0kb downstream 1.0kb downstream 1000 false chr7: 8488677-8489676 Medicago truncatula
Medtr7g025530 2.0kb upstream 2.0kb upstream 6363 true chr7: 8489677-8496039 Medicago truncatula
Medtr7g025530 2.0kb upstream 2.0kb upstream 2000 false chr7: 8494040-8496039 Medicago truncatula
Medtr7g025530 2.0kb downstream 2.0kb downstream 6363 true chr7: 8487677-8494039 Medicago truncatula
Medtr7g025530 2.0kb downstream 2.0kb downstream 2000 false chr7: 8487677-8489676 Medicago truncatula
Medtr7g025530 5.0kb upstream 5.0kb upstream 9363 true chr7: 8489677-8499039 Medicago truncatula
Medtr7g025530 5.0kb upstream 5.0kb upstream 5000 false chr7: 8494040-8499039 Medicago truncatula
Medtr7g025530 5.0kb downstream 5.0kb downstream 9363 true chr7: 8484677-8494039 Medicago truncatula
Medtr7g025530 5.0kb downstream 5.0kb downstream 5000 false chr7: 8484677-8489676 Medicago truncatula
Medtr7g025530 10.0kb upstream 10.0kb upstream 14363 true chr7: 8489677-8504039 Medicago truncatula
Medtr7g025530 10.0kb upstream 10.0kb upstream 10000 false chr7: 8494040-8504039 Medicago truncatula
Medtr7g025530 10.0kb downstream 10.0kb downstream 14363 true chr7: 8479677-8494039 Medicago truncatula
Medtr7g025530 10.0kb downstream 10.0kb downstream 10000 false chr7: 8479677-8489676 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122268038 5265 Fabidae Singleton cluster - no MSA
124071393 5270 Rosid View MSA
123738469 5271 Pentapetalae View MSA
122788721 5272 Eudicot View MSA
122045808 5273 Angiosperm View MSA
121347981 5274 Embryophyte View MSA
123380700 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 0.093        
cufflinks 0.167        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.122        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.083        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain