Gene : Medtr7g025610 M. truncatula Mt4.0v1
Defline:  (1 of 599) PF13041 - PPR repeat family (PPR_2) Description:  PPR containing plant-like protein, putative
Genomic Order:  1041 Name:  ? Medtr7g025610
Secondary Identifier:  ? PAC:31081805
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g025610 0.5kb upstream 0.5kb upstream 2591 true chr7: 8532764-8535354 Medicago truncatula
Medtr7g025610 0.5kb upstream 0.5kb upstream 500 false chr7: 8534855-8535354 Medicago truncatula
Medtr7g025610 0.5kb downstream 0.5kb downstream 2591 true chr7: 8532264-8534854 Medicago truncatula
Medtr7g025610 0.5kb downstream 0.5kb downstream 500 false chr7: 8532264-8532763 Medicago truncatula
Medtr7g025610 1.0kb upstream 1.0kb upstream 3091 true chr7: 8532764-8535854 Medicago truncatula
Medtr7g025610 1.0kb upstream 1.0kb upstream 1000 false chr7: 8534855-8535854 Medicago truncatula
Medtr7g025610 1.0kb downstream 1.0kb downstream 3091 true chr7: 8531764-8534854 Medicago truncatula
Medtr7g025610 1.0kb downstream 1.0kb downstream 1000 false chr7: 8531764-8532763 Medicago truncatula
Medtr7g025610 2.0kb upstream 2.0kb upstream 4091 true chr7: 8532764-8536854 Medicago truncatula
Medtr7g025610 2.0kb upstream 2.0kb upstream 2000 false chr7: 8534855-8536854 Medicago truncatula
Medtr7g025610 2.0kb downstream 2.0kb downstream 4091 true chr7: 8530764-8534854 Medicago truncatula
Medtr7g025610 2.0kb downstream 2.0kb downstream 2000 false chr7: 8530764-8532763 Medicago truncatula
Medtr7g025610 5.0kb upstream 5.0kb upstream 7091 true chr7: 8532764-8539854 Medicago truncatula
Medtr7g025610 5.0kb upstream 5.0kb upstream 5000 false chr7: 8534855-8539854 Medicago truncatula
Medtr7g025610 5.0kb downstream 5.0kb downstream 7091 true chr7: 8527764-8534854 Medicago truncatula
Medtr7g025610 5.0kb downstream 5.0kb downstream 5000 false chr7: 8527764-8532763 Medicago truncatula
Medtr7g025610 10.0kb upstream 10.0kb upstream 12091 true chr7: 8532764-8544854 Medicago truncatula
Medtr7g025610 10.0kb upstream 10.0kb upstream 10000 false chr7: 8534855-8544854 Medicago truncatula
Medtr7g025610 10.0kb downstream 10.0kb downstream 12091 true chr7: 8522764-8534854 Medicago truncatula
Medtr7g025610 10.0kb downstream 10.0kb downstream 10000 false chr7: 8522764-8532763 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041217 5273 Angiosperm View MSA
122301081 5265 Fabidae View MSA
124067032 5270 Rosid View MSA
123740390 5271 Pentapetalae View MSA
122769977 5272 Eudicot View MSA
121309817 5274 Embryophyte View MSA
123347469 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.827        
cufflinks 0.985        
cufflinks 1.556        
cufflinks 0.124       Low
cufflinks 2.195       High
cufflinks 0.053     Low Low
cufflinks 0.596        
cufflinks 1.202        
cufflinks 0.37        

0 Strain