Gene : Medtr7g007850 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11785:SF407 - CATIONIC AMINO ACID TRANSPORTER 9, CHLOROPLASTIC Description:  cationic amino acid transporter
Genomic Order:  195 Name:  ? Medtr7g007850
Secondary Identifier:  ? PAC:31083602
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g007850 0.5kb upstream 0.5kb upstream 6016 true chr7: 1709451-1715466 Medicago truncatula
Medtr7g007850 0.5kb upstream 0.5kb upstream 500 false chr7: 1709451-1709950 Medicago truncatula
Medtr7g007850 0.5kb downstream 0.5kb downstream 6016 true chr7: 1709951-1715966 Medicago truncatula
Medtr7g007850 0.5kb downstream 0.5kb downstream 500 false chr7: 1715467-1715966 Medicago truncatula
Medtr7g007850 1.0kb upstream 1.0kb upstream 6516 true chr7: 1708951-1715466 Medicago truncatula
Medtr7g007850 1.0kb upstream 1.0kb upstream 1000 false chr7: 1708951-1709950 Medicago truncatula
Medtr7g007850 1.0kb downstream 1.0kb downstream 6516 true chr7: 1709951-1716466 Medicago truncatula
Medtr7g007850 1.0kb downstream 1.0kb downstream 1000 false chr7: 1715467-1716466 Medicago truncatula
Medtr7g007850 2.0kb upstream 2.0kb upstream 7516 true chr7: 1707951-1715466 Medicago truncatula
Medtr7g007850 2.0kb upstream 2.0kb upstream 2000 false chr7: 1707951-1709950 Medicago truncatula
Medtr7g007850 2.0kb downstream 2.0kb downstream 7516 true chr7: 1709951-1717466 Medicago truncatula
Medtr7g007850 2.0kb downstream 2.0kb downstream 2000 false chr7: 1715467-1717466 Medicago truncatula
Medtr7g007850 5.0kb upstream 5.0kb upstream 10516 true chr7: 1704951-1715466 Medicago truncatula
Medtr7g007850 5.0kb upstream 5.0kb upstream 5000 false chr7: 1704951-1709950 Medicago truncatula
Medtr7g007850 5.0kb downstream 5.0kb downstream 10516 true chr7: 1709951-1720466 Medicago truncatula
Medtr7g007850 5.0kb downstream 5.0kb downstream 5000 false chr7: 1715467-1720466 Medicago truncatula
Medtr7g007850 10.0kb upstream 10.0kb upstream 15516 true chr7: 1699951-1715466 Medicago truncatula
Medtr7g007850 10.0kb upstream 10.0kb upstream 10000 false chr7: 1699951-1709950 Medicago truncatula
Medtr7g007850 10.0kb downstream 10.0kb downstream 15516 true chr7: 1709951-1725466 Medicago truncatula
Medtr7g007850 10.0kb downstream 10.0kb downstream 10000 false chr7: 1715467-1725466 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306841 5265 Fabidae View MSA
124060661 5270 Rosid View MSA
123749669 5271 Pentapetalae View MSA
122791954 5272 Eudicot View MSA
122045273 5273 Angiosperm View MSA
121343810 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.517       Low
cufflinks 1.841       High
cufflinks 1.441        
cufflinks 1.71        
cufflinks 1.368        
cufflinks 1.05        
cufflinks 1.125        
cufflinks 1.262        
cufflinks 1.26        

0 Strain