Gene : Medtr7g009590 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11028 - VACUOLAR ATP SYNTHASE SUBUNIT AC39 Description:  vacuolar H+ ATPase V0 sector, subunit D
Genomic Order:  260 Name:  ? Medtr7g009590
Secondary Identifier:  ? PAC:31083781
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g009590 0.5kb upstream 0.5kb upstream 5540 true chr7: 2140833-2146372 Medicago truncatula
Medtr7g009590 0.5kb upstream 0.5kb upstream 500 false chr7: 2145873-2146372 Medicago truncatula
Medtr7g009590 0.5kb downstream 0.5kb downstream 5540 true chr7: 2140333-2145872 Medicago truncatula
Medtr7g009590 0.5kb downstream 0.5kb downstream 500 false chr7: 2140333-2140832 Medicago truncatula
Medtr7g009590 1.0kb upstream 1.0kb upstream 6040 true chr7: 2140833-2146872 Medicago truncatula
Medtr7g009590 1.0kb upstream 1.0kb upstream 1000 false chr7: 2145873-2146872 Medicago truncatula
Medtr7g009590 1.0kb downstream 1.0kb downstream 6040 true chr7: 2139833-2145872 Medicago truncatula
Medtr7g009590 1.0kb downstream 1.0kb downstream 1000 false chr7: 2139833-2140832 Medicago truncatula
Medtr7g009590 2.0kb upstream 2.0kb upstream 7040 true chr7: 2140833-2147872 Medicago truncatula
Medtr7g009590 2.0kb upstream 2.0kb upstream 2000 false chr7: 2145873-2147872 Medicago truncatula
Medtr7g009590 2.0kb downstream 2.0kb downstream 7040 true chr7: 2138833-2145872 Medicago truncatula
Medtr7g009590 2.0kb downstream 2.0kb downstream 2000 false chr7: 2138833-2140832 Medicago truncatula
Medtr7g009590 5.0kb upstream 5.0kb upstream 10040 true chr7: 2140833-2150872 Medicago truncatula
Medtr7g009590 5.0kb upstream 5.0kb upstream 5000 false chr7: 2145873-2150872 Medicago truncatula
Medtr7g009590 5.0kb downstream 5.0kb downstream 10040 true chr7: 2135833-2145872 Medicago truncatula
Medtr7g009590 5.0kb downstream 5.0kb downstream 5000 false chr7: 2135833-2140832 Medicago truncatula
Medtr7g009590 10.0kb upstream 10.0kb upstream 15040 true chr7: 2140833-2155872 Medicago truncatula
Medtr7g009590 10.0kb upstream 10.0kb upstream 10000 false chr7: 2145873-2155872 Medicago truncatula
Medtr7g009590 10.0kb downstream 10.0kb downstream 15040 true chr7: 2130833-2145872 Medicago truncatula
Medtr7g009590 10.0kb downstream 10.0kb downstream 10000 false chr7: 2130833-2140832 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301591 5265 Fabidae View MSA
124065072 5270 Rosid View MSA
123742149 5271 Pentapetalae View MSA
122786040 5272 Eudicot View MSA
122045239 5273 Angiosperm View MSA
121345158 5274 Embryophyte View MSA
123427776 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.612     High  
cufflinks 23.925     High  
cufflinks 20.02     High  
cufflinks 17.948     High  
cufflinks 21.84     High  
cufflinks 9.322       Low
cufflinks 22.451     High  
cufflinks 20.803     High  
cufflinks 29.485     High High

0 Strain