Gene : Medtr7g011060 M. truncatula Mt4.0v1
Defline:  (1 of 40) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Description:  expansin A10
Genomic Order:  347 Name:  ? Medtr7g011060
Secondary Identifier:  ? PAC:31078604
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g011060 0.5kb upstream 0.5kb upstream 3129 true chr7: 2865390-2868518 Medicago truncatula
Medtr7g011060 0.5kb upstream 0.5kb upstream 500 false chr7: 2868019-2868518 Medicago truncatula
Medtr7g011060 0.5kb downstream 0.5kb downstream 3129 true chr7: 2864890-2868018 Medicago truncatula
Medtr7g011060 0.5kb downstream 0.5kb downstream 500 false chr7: 2864890-2865389 Medicago truncatula
Medtr7g011060 1.0kb upstream 1.0kb upstream 3629 true chr7: 2865390-2869018 Medicago truncatula
Medtr7g011060 1.0kb upstream 1.0kb upstream 1000 false chr7: 2868019-2869018 Medicago truncatula
Medtr7g011060 1.0kb downstream 1.0kb downstream 3629 true chr7: 2864390-2868018 Medicago truncatula
Medtr7g011060 1.0kb downstream 1.0kb downstream 1000 false chr7: 2864390-2865389 Medicago truncatula
Medtr7g011060 2.0kb upstream 2.0kb upstream 4629 true chr7: 2865390-2870018 Medicago truncatula
Medtr7g011060 2.0kb upstream 2.0kb upstream 2000 false chr7: 2868019-2870018 Medicago truncatula
Medtr7g011060 2.0kb downstream 2.0kb downstream 4629 true chr7: 2863390-2868018 Medicago truncatula
Medtr7g011060 2.0kb downstream 2.0kb downstream 2000 false chr7: 2863390-2865389 Medicago truncatula
Medtr7g011060 5.0kb upstream 5.0kb upstream 7629 true chr7: 2865390-2873018 Medicago truncatula
Medtr7g011060 5.0kb upstream 5.0kb upstream 5000 false chr7: 2868019-2873018 Medicago truncatula
Medtr7g011060 5.0kb downstream 5.0kb downstream 7629 true chr7: 2860390-2868018 Medicago truncatula
Medtr7g011060 5.0kb downstream 5.0kb downstream 5000 false chr7: 2860390-2865389 Medicago truncatula
Medtr7g011060 10.0kb upstream 10.0kb upstream 12629 true chr7: 2865390-2878018 Medicago truncatula
Medtr7g011060 10.0kb upstream 10.0kb upstream 10000 false chr7: 2868019-2878018 Medicago truncatula
Medtr7g011060 10.0kb downstream 10.0kb downstream 12629 true chr7: 2855390-2868018 Medicago truncatula
Medtr7g011060 10.0kb downstream 10.0kb downstream 10000 false chr7: 2855390-2865389 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310156 5265 Fabidae View MSA
124070528 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.004     Low Low
cufflinks 2.674        
cufflinks 2.077        
cufflinks 3.697        
cufflinks 3.968        
cufflinks 0.265        
cufflinks 0.956        
cufflinks 1.69        
cufflinks 2.485        

0 Strain