Gene : Medtr7g010800 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23076:SF54 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 6, CHLOROPLASTIC Description:  ATP-dependent zinc metalloprotease FTSH protein
Genomic Order:  326 Name:  ? Medtr7g010800
Secondary Identifier:  ? PAC:31077370
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g010800 0.5kb upstream 0.5kb upstream 4924 true chr7: 2723939-2728862 Medicago truncatula
Medtr7g010800 0.5kb upstream 0.5kb upstream 500 false chr7: 2728363-2728862 Medicago truncatula
Medtr7g010800 0.5kb downstream 0.5kb downstream 4924 true chr7: 2723439-2728362 Medicago truncatula
Medtr7g010800 0.5kb downstream 0.5kb downstream 500 false chr7: 2723439-2723938 Medicago truncatula
Medtr7g010800 1.0kb upstream 1.0kb upstream 5424 true chr7: 2723939-2729362 Medicago truncatula
Medtr7g010800 1.0kb upstream 1.0kb upstream 1000 false chr7: 2728363-2729362 Medicago truncatula
Medtr7g010800 1.0kb downstream 1.0kb downstream 5424 true chr7: 2722939-2728362 Medicago truncatula
Medtr7g010800 1.0kb downstream 1.0kb downstream 1000 false chr7: 2722939-2723938 Medicago truncatula
Medtr7g010800 2.0kb upstream 2.0kb upstream 6424 true chr7: 2723939-2730362 Medicago truncatula
Medtr7g010800 2.0kb upstream 2.0kb upstream 2000 false chr7: 2728363-2730362 Medicago truncatula
Medtr7g010800 2.0kb downstream 2.0kb downstream 6424 true chr7: 2721939-2728362 Medicago truncatula
Medtr7g010800 2.0kb downstream 2.0kb downstream 2000 false chr7: 2721939-2723938 Medicago truncatula
Medtr7g010800 5.0kb upstream 5.0kb upstream 9424 true chr7: 2723939-2733362 Medicago truncatula
Medtr7g010800 5.0kb upstream 5.0kb upstream 5000 false chr7: 2728363-2733362 Medicago truncatula
Medtr7g010800 5.0kb downstream 5.0kb downstream 9424 true chr7: 2718939-2728362 Medicago truncatula
Medtr7g010800 5.0kb downstream 5.0kb downstream 5000 false chr7: 2718939-2723938 Medicago truncatula
Medtr7g010800 10.0kb upstream 10.0kb upstream 14424 true chr7: 2723939-2738362 Medicago truncatula
Medtr7g010800 10.0kb upstream 10.0kb upstream 10000 false chr7: 2728363-2738362 Medicago truncatula
Medtr7g010800 10.0kb downstream 10.0kb downstream 14424 true chr7: 2713939-2728362 Medicago truncatula
Medtr7g010800 10.0kb downstream 10.0kb downstream 10000 false chr7: 2713939-2723938 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300352 5265 Fabidae View MSA
124066347 5270 Rosid View MSA
123741338 5271 Pentapetalae View MSA
122790774 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023     Low High
cufflinks 0.025     Low High
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain