Gene : Medtr7g011820 M. truncatula Mt4.0v1
Defline:  (1 of 108) PF03106 - WRKY DNA -binding domain (WRKY) Description:  WRKY transcription factor 3
Genomic Order:  397 Name:  ? Medtr7g011820
Secondary Identifier:  ? PAC:31079551
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g011820 0.5kb upstream 0.5kb upstream 7610 true chr7: 3257188-3264797 Medicago truncatula
Medtr7g011820 0.5kb upstream 0.5kb upstream 500 false chr7: 3264298-3264797 Medicago truncatula
Medtr7g011820 0.5kb downstream 0.5kb downstream 7610 true chr7: 3256688-3264297 Medicago truncatula
Medtr7g011820 0.5kb downstream 0.5kb downstream 500 false chr7: 3256688-3257187 Medicago truncatula
Medtr7g011820 1.0kb upstream 1.0kb upstream 8110 true chr7: 3257188-3265297 Medicago truncatula
Medtr7g011820 1.0kb upstream 1.0kb upstream 1000 false chr7: 3264298-3265297 Medicago truncatula
Medtr7g011820 1.0kb downstream 1.0kb downstream 8110 true chr7: 3256188-3264297 Medicago truncatula
Medtr7g011820 1.0kb downstream 1.0kb downstream 1000 false chr7: 3256188-3257187 Medicago truncatula
Medtr7g011820 2.0kb upstream 2.0kb upstream 9110 true chr7: 3257188-3266297 Medicago truncatula
Medtr7g011820 2.0kb upstream 2.0kb upstream 2000 false chr7: 3264298-3266297 Medicago truncatula
Medtr7g011820 2.0kb downstream 2.0kb downstream 9110 true chr7: 3255188-3264297 Medicago truncatula
Medtr7g011820 2.0kb downstream 2.0kb downstream 2000 false chr7: 3255188-3257187 Medicago truncatula
Medtr7g011820 5.0kb upstream 5.0kb upstream 12110 true chr7: 3257188-3269297 Medicago truncatula
Medtr7g011820 5.0kb upstream 5.0kb upstream 5000 false chr7: 3264298-3269297 Medicago truncatula
Medtr7g011820 5.0kb downstream 5.0kb downstream 12110 true chr7: 3252188-3264297 Medicago truncatula
Medtr7g011820 5.0kb downstream 5.0kb downstream 5000 false chr7: 3252188-3257187 Medicago truncatula
Medtr7g011820 10.0kb upstream 10.0kb upstream 17110 true chr7: 3257188-3274297 Medicago truncatula
Medtr7g011820 10.0kb upstream 10.0kb upstream 10000 false chr7: 3264298-3274297 Medicago truncatula
Medtr7g011820 10.0kb downstream 10.0kb downstream 17110 true chr7: 3247188-3264297 Medicago truncatula
Medtr7g011820 10.0kb downstream 10.0kb downstream 10000 false chr7: 3247188-3257187 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306351 5265 Fabidae View MSA
124070868 5270 Rosid View MSA
123742422 5271 Pentapetalae View MSA
122788508 5272 Eudicot View MSA
122041677 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.176        
cufflinks 5.626        
cufflinks 7.22       High
cufflinks 5.762        
cufflinks 7.297       High
cufflinks 3.257       Low
cufflinks 4.931        
cufflinks 6.051        
cufflinks 4.721        

0 Strain