Gene : Medtr7g011230 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.5.1.48 - Cystathionine gamma-synthase / O-succinylhomoserine synthetase Description:  cystathionine gamma-synthase
Genomic Order:  357 Name:  ? Medtr7g011230
Secondary Identifier:  ? PAC:31082670
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g011230 0.5kb upstream 0.5kb upstream 5875 true chr7: 2980299-2986173 Medicago truncatula
Medtr7g011230 0.5kb upstream 0.5kb upstream 500 false chr7: 2980299-2980798 Medicago truncatula
Medtr7g011230 0.5kb downstream 0.5kb downstream 5875 true chr7: 2980799-2986673 Medicago truncatula
Medtr7g011230 0.5kb downstream 0.5kb downstream 500 false chr7: 2986174-2986673 Medicago truncatula
Medtr7g011230 1.0kb upstream 1.0kb upstream 6375 true chr7: 2979799-2986173 Medicago truncatula
Medtr7g011230 1.0kb upstream 1.0kb upstream 1000 false chr7: 2979799-2980798 Medicago truncatula
Medtr7g011230 1.0kb downstream 1.0kb downstream 6375 true chr7: 2980799-2987173 Medicago truncatula
Medtr7g011230 1.0kb downstream 1.0kb downstream 1000 false chr7: 2986174-2987173 Medicago truncatula
Medtr7g011230 2.0kb upstream 2.0kb upstream 7375 true chr7: 2978799-2986173 Medicago truncatula
Medtr7g011230 2.0kb upstream 2.0kb upstream 2000 false chr7: 2978799-2980798 Medicago truncatula
Medtr7g011230 2.0kb downstream 2.0kb downstream 7375 true chr7: 2980799-2988173 Medicago truncatula
Medtr7g011230 2.0kb downstream 2.0kb downstream 2000 false chr7: 2986174-2988173 Medicago truncatula
Medtr7g011230 5.0kb upstream 5.0kb upstream 10375 true chr7: 2975799-2986173 Medicago truncatula
Medtr7g011230 5.0kb upstream 5.0kb upstream 5000 false chr7: 2975799-2980798 Medicago truncatula
Medtr7g011230 5.0kb downstream 5.0kb downstream 10375 true chr7: 2980799-2991173 Medicago truncatula
Medtr7g011230 5.0kb downstream 5.0kb downstream 5000 false chr7: 2986174-2991173 Medicago truncatula
Medtr7g011230 10.0kb upstream 10.0kb upstream 15375 true chr7: 2970799-2986173 Medicago truncatula
Medtr7g011230 10.0kb upstream 10.0kb upstream 10000 false chr7: 2970799-2980798 Medicago truncatula
Medtr7g011230 10.0kb downstream 10.0kb downstream 15375 true chr7: 2980799-2996173 Medicago truncatula
Medtr7g011230 10.0kb downstream 10.0kb downstream 10000 false chr7: 2986174-2996173 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041119 5273 Angiosperm View MSA
122299349 5265 Fabidae View MSA
124067979 5270 Rosid View MSA
123738660 5271 Pentapetalae View MSA
122791406 5272 Eudicot View MSA
121346184 5274 Embryophyte View MSA
123428336 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.196       Low
cufflinks 30.227     High High
cufflinks 17.848     High  
cufflinks 27.055     High  
cufflinks 34.552     High High
cufflinks 14.994     High  
cufflinks 11.829     High  
cufflinks 16.785     High  
cufflinks 22.358     High  

0 Strain