Gene : Medtr7g013100 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23151//PTHR23151:SF70 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Description:  biotin carboxyl carrier acetyl-CoA carboxylase
Genomic Order:  463 Name:  ? Medtr7g013100
Secondary Identifier:  ? PAC:31078974
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1264 Medicago truncatula pathologic  
Mtruncatula PWY-4381 Medicago truncatula pathologic  
Mtruncatula PWY-5156 Medicago truncatula pathologic  
Mtruncatula PWY-7388 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g013100 0.5kb upstream 0.5kb upstream 5578 true chr7: 3719876-3725453 Medicago truncatula
Medtr7g013100 0.5kb upstream 0.5kb upstream 500 false chr7: 3719876-3720375 Medicago truncatula
Medtr7g013100 0.5kb downstream 0.5kb downstream 5578 true chr7: 3720376-3725953 Medicago truncatula
Medtr7g013100 0.5kb downstream 0.5kb downstream 500 false chr7: 3725454-3725953 Medicago truncatula
Medtr7g013100 1.0kb upstream 1.0kb upstream 6078 true chr7: 3719376-3725453 Medicago truncatula
Medtr7g013100 1.0kb upstream 1.0kb upstream 1000 false chr7: 3719376-3720375 Medicago truncatula
Medtr7g013100 1.0kb downstream 1.0kb downstream 6078 true chr7: 3720376-3726453 Medicago truncatula
Medtr7g013100 1.0kb downstream 1.0kb downstream 1000 false chr7: 3725454-3726453 Medicago truncatula
Medtr7g013100 2.0kb upstream 2.0kb upstream 7078 true chr7: 3718376-3725453 Medicago truncatula
Medtr7g013100 2.0kb upstream 2.0kb upstream 2000 false chr7: 3718376-3720375 Medicago truncatula
Medtr7g013100 2.0kb downstream 2.0kb downstream 7078 true chr7: 3720376-3727453 Medicago truncatula
Medtr7g013100 2.0kb downstream 2.0kb downstream 2000 false chr7: 3725454-3727453 Medicago truncatula
Medtr7g013100 5.0kb upstream 5.0kb upstream 10078 true chr7: 3715376-3725453 Medicago truncatula
Medtr7g013100 5.0kb upstream 5.0kb upstream 5000 false chr7: 3715376-3720375 Medicago truncatula
Medtr7g013100 5.0kb downstream 5.0kb downstream 10078 true chr7: 3720376-3730453 Medicago truncatula
Medtr7g013100 5.0kb downstream 5.0kb downstream 5000 false chr7: 3725454-3730453 Medicago truncatula
Medtr7g013100 10.0kb upstream 10.0kb upstream 15078 true chr7: 3710376-3725453 Medicago truncatula
Medtr7g013100 10.0kb upstream 10.0kb upstream 10000 false chr7: 3710376-3720375 Medicago truncatula
Medtr7g013100 10.0kb downstream 10.0kb downstream 15078 true chr7: 3720376-3735453 Medicago truncatula
Medtr7g013100 10.0kb downstream 10.0kb downstream 10000 false chr7: 3725454-3735453 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311832 5265 Fabidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.333       Low
cufflinks 2.444        
cufflinks 1.812        
cufflinks 1.075        
cufflinks 2.924        
cufflinks 0.716       Low
cufflinks 1.876        
cufflinks 1.983        
cufflinks 2.918        

0 Strain