Gene : Medtr7g016630 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR11945:SF155 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL8-RELATED Description:  MADS-box transcription factor
Genomic Order:  627 Name:  ? Medtr7g016630
Secondary Identifier:  ? PAC:31080056
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g016630 0.5kb upstream 0.5kb upstream 7386 true chr7: 5250911-5258296 Medicago truncatula
Medtr7g016630 0.5kb upstream 0.5kb upstream 500 false chr7: 5250911-5251410 Medicago truncatula
Medtr7g016630 0.5kb downstream 0.5kb downstream 7386 true chr7: 5251411-5258796 Medicago truncatula
Medtr7g016630 0.5kb downstream 0.5kb downstream 500 false chr7: 5258297-5258796 Medicago truncatula
Medtr7g016630 1.0kb upstream 1.0kb upstream 7886 true chr7: 5250411-5258296 Medicago truncatula
Medtr7g016630 1.0kb upstream 1.0kb upstream 1000 false chr7: 5250411-5251410 Medicago truncatula
Medtr7g016630 1.0kb downstream 1.0kb downstream 7886 true chr7: 5251411-5259296 Medicago truncatula
Medtr7g016630 1.0kb downstream 1.0kb downstream 1000 false chr7: 5258297-5259296 Medicago truncatula
Medtr7g016630 2.0kb upstream 2.0kb upstream 8886 true chr7: 5249411-5258296 Medicago truncatula
Medtr7g016630 2.0kb upstream 2.0kb upstream 2000 false chr7: 5249411-5251410 Medicago truncatula
Medtr7g016630 2.0kb downstream 2.0kb downstream 8886 true chr7: 5251411-5260296 Medicago truncatula
Medtr7g016630 2.0kb downstream 2.0kb downstream 2000 false chr7: 5258297-5260296 Medicago truncatula
Medtr7g016630 5.0kb upstream 5.0kb upstream 11886 true chr7: 5246411-5258296 Medicago truncatula
Medtr7g016630 5.0kb upstream 5.0kb upstream 5000 false chr7: 5246411-5251410 Medicago truncatula
Medtr7g016630 5.0kb downstream 5.0kb downstream 11886 true chr7: 5251411-5263296 Medicago truncatula
Medtr7g016630 5.0kb downstream 5.0kb downstream 5000 false chr7: 5258297-5263296 Medicago truncatula
Medtr7g016630 10.0kb upstream 10.0kb upstream 16886 true chr7: 5241411-5258296 Medicago truncatula
Medtr7g016630 10.0kb upstream 10.0kb upstream 10000 false chr7: 5241411-5251410 Medicago truncatula
Medtr7g016630 10.0kb downstream 10.0kb downstream 16886 true chr7: 5251411-5268296 Medicago truncatula
Medtr7g016630 10.0kb downstream 10.0kb downstream 10000 false chr7: 5258297-5268296 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
122314774 5265 Fabidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.011     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.135       High
cufflinks 0.014     Low  
cufflinks 0.056     Low  

0 Strain