Gene : Medtr7g015950 M. truncatula Mt4.0v1
Defline:  (1 of 15) PF04833 - COBRA-like protein (COBRA) Description:  COBRA-like protein 2 precursor
Genomic Order:  600 Name:  ? Medtr7g015950
Secondary Identifier:  ? PAC:31078060
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g015950 0.5kb upstream 0.5kb upstream 4886 true chr7: 5004654-5009539 Medicago truncatula
Medtr7g015950 0.5kb upstream 0.5kb upstream 500 false chr7: 5004654-5005153 Medicago truncatula
Medtr7g015950 0.5kb downstream 0.5kb downstream 4886 true chr7: 5005154-5010039 Medicago truncatula
Medtr7g015950 0.5kb downstream 0.5kb downstream 500 false chr7: 5009540-5010039 Medicago truncatula
Medtr7g015950 1.0kb upstream 1.0kb upstream 5386 true chr7: 5004154-5009539 Medicago truncatula
Medtr7g015950 1.0kb upstream 1.0kb upstream 1000 false chr7: 5004154-5005153 Medicago truncatula
Medtr7g015950 1.0kb downstream 1.0kb downstream 5386 true chr7: 5005154-5010539 Medicago truncatula
Medtr7g015950 1.0kb downstream 1.0kb downstream 1000 false chr7: 5009540-5010539 Medicago truncatula
Medtr7g015950 2.0kb upstream 2.0kb upstream 6386 true chr7: 5003154-5009539 Medicago truncatula
Medtr7g015950 2.0kb upstream 2.0kb upstream 2000 false chr7: 5003154-5005153 Medicago truncatula
Medtr7g015950 2.0kb downstream 2.0kb downstream 6386 true chr7: 5005154-5011539 Medicago truncatula
Medtr7g015950 2.0kb downstream 2.0kb downstream 2000 false chr7: 5009540-5011539 Medicago truncatula
Medtr7g015950 5.0kb upstream 5.0kb upstream 9386 true chr7: 5000154-5009539 Medicago truncatula
Medtr7g015950 5.0kb upstream 5.0kb upstream 5000 false chr7: 5000154-5005153 Medicago truncatula
Medtr7g015950 5.0kb downstream 5.0kb downstream 9386 true chr7: 5005154-5014539 Medicago truncatula
Medtr7g015950 5.0kb downstream 5.0kb downstream 5000 false chr7: 5009540-5014539 Medicago truncatula
Medtr7g015950 10.0kb upstream 10.0kb upstream 14386 true chr7: 4995154-5009539 Medicago truncatula
Medtr7g015950 10.0kb upstream 10.0kb upstream 10000 false chr7: 4995154-5005153 Medicago truncatula
Medtr7g015950 10.0kb downstream 10.0kb downstream 14386 true chr7: 5005154-5019539 Medicago truncatula
Medtr7g015950 10.0kb downstream 10.0kb downstream 10000 false chr7: 5009540-5019539 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311980 5265 Fabidae View MSA
124062933 5270 Rosid View MSA
123750183 5271 Pentapetalae View MSA
122789403 5272 Eudicot View MSA
122044037 5273 Angiosperm View MSA
121349086 5274 Embryophyte View MSA
123381159 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.955     High High
cufflinks 10.49     High  
cufflinks 6.536        
cufflinks 5.406        
cufflinks 8.464        
cufflinks 6.539        
cufflinks 6.717        
cufflinks 4.766       Low
cufflinks 13.547     High  

0 Strain