Gene : Medtr7g095500 M. truncatula Mt4.0v1
Defline:  (1 of 8) PF05703//PF08458 - Auxin canalisation (Auxin_canalis) // Plant pleckstrin homology-like region (PH_2) Description:  auxin canalisation protein
Genomic Order:  4655 Name:  ? Medtr7g095500
Secondary Identifier:  ? PAC:31080602
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g095500 0.5kb upstream 0.5kb upstream 3603 true chr7: 38267193-38270795 Medicago truncatula
Medtr7g095500 0.5kb upstream 0.5kb upstream 500 false chr7: 38267193-38267692 Medicago truncatula
Medtr7g095500 0.5kb downstream 0.5kb downstream 3603 true chr7: 38267693-38271295 Medicago truncatula
Medtr7g095500 0.5kb downstream 0.5kb downstream 500 false chr7: 38270796-38271295 Medicago truncatula
Medtr7g095500 1.0kb upstream 1.0kb upstream 4103 true chr7: 38266693-38270795 Medicago truncatula
Medtr7g095500 1.0kb upstream 1.0kb upstream 1000 false chr7: 38266693-38267692 Medicago truncatula
Medtr7g095500 1.0kb downstream 1.0kb downstream 4103 true chr7: 38267693-38271795 Medicago truncatula
Medtr7g095500 1.0kb downstream 1.0kb downstream 1000 false chr7: 38270796-38271795 Medicago truncatula
Medtr7g095500 2.0kb upstream 2.0kb upstream 5103 true chr7: 38265693-38270795 Medicago truncatula
Medtr7g095500 2.0kb upstream 2.0kb upstream 2000 false chr7: 38265693-38267692 Medicago truncatula
Medtr7g095500 2.0kb downstream 2.0kb downstream 5103 true chr7: 38267693-38272795 Medicago truncatula
Medtr7g095500 2.0kb downstream 2.0kb downstream 2000 false chr7: 38270796-38272795 Medicago truncatula
Medtr7g095500 5.0kb upstream 5.0kb upstream 8103 true chr7: 38262693-38270795 Medicago truncatula
Medtr7g095500 5.0kb upstream 5.0kb upstream 5000 false chr7: 38262693-38267692 Medicago truncatula
Medtr7g095500 5.0kb downstream 5.0kb downstream 8103 true chr7: 38267693-38275795 Medicago truncatula
Medtr7g095500 5.0kb downstream 5.0kb downstream 5000 false chr7: 38270796-38275795 Medicago truncatula
Medtr7g095500 10.0kb upstream 10.0kb upstream 13103 true chr7: 38257693-38270795 Medicago truncatula
Medtr7g095500 10.0kb upstream 10.0kb upstream 10000 false chr7: 38257693-38267692 Medicago truncatula
Medtr7g095500 10.0kb downstream 10.0kb downstream 13103 true chr7: 38267693-38280795 Medicago truncatula
Medtr7g095500 10.0kb downstream 10.0kb downstream 10000 false chr7: 38270796-38280795 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307435 5265 Fabidae View MSA
124061946 5270 Rosid View MSA
123746535 5271 Pentapetalae View MSA
122785782 5272 Eudicot View MSA
122047623 5273 Angiosperm View MSA
121348921 5274 Embryophyte View MSA
123381080 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.133        

0 Strain