Gene : Medtr7g096350 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11514:SF53 - TRANSCRIPTION FACTOR BHLH3 Description:  ABA-inducible bHLH-type transcription factor
Genomic Order:  4710 Name:  ? Medtr7g096350
Secondary Identifier:  ? PAC:31082362
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g096350 0.5kb upstream 0.5kb upstream 3288 true chr7: 38658503-38661790 Medicago truncatula
Medtr7g096350 0.5kb upstream 0.5kb upstream 500 false chr7: 38658503-38659002 Medicago truncatula
Medtr7g096350 0.5kb downstream 0.5kb downstream 3288 true chr7: 38659003-38662290 Medicago truncatula
Medtr7g096350 0.5kb downstream 0.5kb downstream 500 false chr7: 38661791-38662290 Medicago truncatula
Medtr7g096350 1.0kb upstream 1.0kb upstream 3788 true chr7: 38658003-38661790 Medicago truncatula
Medtr7g096350 1.0kb upstream 1.0kb upstream 1000 false chr7: 38658003-38659002 Medicago truncatula
Medtr7g096350 1.0kb downstream 1.0kb downstream 3788 true chr7: 38659003-38662790 Medicago truncatula
Medtr7g096350 1.0kb downstream 1.0kb downstream 1000 false chr7: 38661791-38662790 Medicago truncatula
Medtr7g096350 2.0kb upstream 2.0kb upstream 4788 true chr7: 38657003-38661790 Medicago truncatula
Medtr7g096350 2.0kb upstream 2.0kb upstream 2000 false chr7: 38657003-38659002 Medicago truncatula
Medtr7g096350 2.0kb downstream 2.0kb downstream 4788 true chr7: 38659003-38663790 Medicago truncatula
Medtr7g096350 2.0kb downstream 2.0kb downstream 2000 false chr7: 38661791-38663790 Medicago truncatula
Medtr7g096350 5.0kb upstream 5.0kb upstream 7788 true chr7: 38654003-38661790 Medicago truncatula
Medtr7g096350 5.0kb upstream 5.0kb upstream 5000 false chr7: 38654003-38659002 Medicago truncatula
Medtr7g096350 5.0kb downstream 5.0kb downstream 7788 true chr7: 38659003-38666790 Medicago truncatula
Medtr7g096350 5.0kb downstream 5.0kb downstream 5000 false chr7: 38661791-38666790 Medicago truncatula
Medtr7g096350 10.0kb upstream 10.0kb upstream 12788 true chr7: 38649003-38661790 Medicago truncatula
Medtr7g096350 10.0kb upstream 10.0kb upstream 10000 false chr7: 38649003-38659002 Medicago truncatula
Medtr7g096350 10.0kb downstream 10.0kb downstream 12788 true chr7: 38659003-38671790 Medicago truncatula
Medtr7g096350 10.0kb downstream 10.0kb downstream 10000 false chr7: 38661791-38671790 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307426 5265 Fabidae View MSA
124062097 5270 Rosid View MSA
123736718 5271 Pentapetalae View MSA
122790494 5272 Eudicot View MSA
122049389 5273 Angiosperm View MSA
121351644 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.615        
cufflinks 10.477     High  
cufflinks 10.833     High  
cufflinks 2.784       Low
cufflinks 14.094     High High
cufflinks 1.474       Low
cufflinks 6.545        
cufflinks 9.661     High  
cufflinks 5.158        

0 Strain