Gene : Medtr7g005950 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR12741:SF21 - CALLOSE SYNTHASE 3 Description:  glucan synthase-like protein
Genomic Order:  54 Name:  ? Medtr7g005950
Secondary Identifier:  ? PAC:31076999
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6773 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g005950 0.5kb upstream 0.5kb upstream 21252 true chr7: 406267-427518 Medicago truncatula
Medtr7g005950 0.5kb upstream 0.5kb upstream 500 false chr7: 427019-427518 Medicago truncatula
Medtr7g005950 0.5kb downstream 0.5kb downstream 21252 true chr7: 405767-427018 Medicago truncatula
Medtr7g005950 0.5kb downstream 0.5kb downstream 500 false chr7: 405767-406266 Medicago truncatula
Medtr7g005950 1.0kb upstream 1.0kb upstream 21752 true chr7: 406267-428018 Medicago truncatula
Medtr7g005950 1.0kb upstream 1.0kb upstream 1000 false chr7: 427019-428018 Medicago truncatula
Medtr7g005950 1.0kb downstream 1.0kb downstream 21752 true chr7: 405267-427018 Medicago truncatula
Medtr7g005950 1.0kb downstream 1.0kb downstream 1000 false chr7: 405267-406266 Medicago truncatula
Medtr7g005950 2.0kb upstream 2.0kb upstream 22752 true chr7: 406267-429018 Medicago truncatula
Medtr7g005950 2.0kb upstream 2.0kb upstream 2000 false chr7: 427019-429018 Medicago truncatula
Medtr7g005950 2.0kb downstream 2.0kb downstream 22752 true chr7: 404267-427018 Medicago truncatula
Medtr7g005950 2.0kb downstream 2.0kb downstream 2000 false chr7: 404267-406266 Medicago truncatula
Medtr7g005950 5.0kb upstream 5.0kb upstream 25752 true chr7: 406267-432018 Medicago truncatula
Medtr7g005950 5.0kb upstream 5.0kb upstream 5000 false chr7: 427019-432018 Medicago truncatula
Medtr7g005950 5.0kb downstream 5.0kb downstream 25752 true chr7: 401267-427018 Medicago truncatula
Medtr7g005950 5.0kb downstream 5.0kb downstream 5000 false chr7: 401267-406266 Medicago truncatula
Medtr7g005950 10.0kb upstream 10.0kb upstream 30752 true chr7: 406267-437018 Medicago truncatula
Medtr7g005950 10.0kb upstream 10.0kb upstream 10000 false chr7: 427019-437018 Medicago truncatula
Medtr7g005950 10.0kb downstream 10.0kb downstream 30752 true chr7: 396267-427018 Medicago truncatula
Medtr7g005950 10.0kb downstream 10.0kb downstream 10000 false chr7: 396267-406266 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301991 5265 Fabidae View MSA
124072639 5270 Rosid View MSA
123745171 5271 Pentapetalae View MSA
122788947 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.163       High
cufflinks 0.326        
cufflinks 0.295        
cufflinks 0.107       Low
cufflinks 0.586        
cufflinks 0.042     Low Low
cufflinks 0.352        
cufflinks 0.261        
cufflinks 0.393        

0 Strain