Gene : Medtr7g006450 M. truncatula Mt4.0v1
Defline:  (1 of 6) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Description:  leucyl-tRNA synthetase
Genomic Order:  82 Name:  ? Medtr7g006450
Secondary Identifier:  ? PAC:31082205
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRNA-CHARGING-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g006450 0.5kb upstream 0.5kb upstream 6385 true chr7: 697537-703921 Medicago truncatula
Medtr7g006450 0.5kb upstream 0.5kb upstream 500 false chr7: 697537-698036 Medicago truncatula
Medtr7g006450 0.5kb downstream 0.5kb downstream 6385 true chr7: 698037-704421 Medicago truncatula
Medtr7g006450 0.5kb downstream 0.5kb downstream 500 false chr7: 703922-704421 Medicago truncatula
Medtr7g006450 1.0kb upstream 1.0kb upstream 6885 true chr7: 697037-703921 Medicago truncatula
Medtr7g006450 1.0kb upstream 1.0kb upstream 1000 false chr7: 697037-698036 Medicago truncatula
Medtr7g006450 1.0kb downstream 1.0kb downstream 6885 true chr7: 698037-704921 Medicago truncatula
Medtr7g006450 1.0kb downstream 1.0kb downstream 1000 false chr7: 703922-704921 Medicago truncatula
Medtr7g006450 2.0kb upstream 2.0kb upstream 7885 true chr7: 696037-703921 Medicago truncatula
Medtr7g006450 2.0kb upstream 2.0kb upstream 2000 false chr7: 696037-698036 Medicago truncatula
Medtr7g006450 2.0kb downstream 2.0kb downstream 7885 true chr7: 698037-705921 Medicago truncatula
Medtr7g006450 2.0kb downstream 2.0kb downstream 2000 false chr7: 703922-705921 Medicago truncatula
Medtr7g006450 5.0kb upstream 5.0kb upstream 10885 true chr7: 693037-703921 Medicago truncatula
Medtr7g006450 5.0kb upstream 5.0kb upstream 5000 false chr7: 693037-698036 Medicago truncatula
Medtr7g006450 5.0kb downstream 5.0kb downstream 10885 true chr7: 698037-708921 Medicago truncatula
Medtr7g006450 5.0kb downstream 5.0kb downstream 5000 false chr7: 703922-708921 Medicago truncatula
Medtr7g006450 10.0kb upstream 10.0kb upstream 15885 true chr7: 688037-703921 Medicago truncatula
Medtr7g006450 10.0kb upstream 10.0kb upstream 10000 false chr7: 688037-698036 Medicago truncatula
Medtr7g006450 10.0kb downstream 10.0kb downstream 15885 true chr7: 698037-713921 Medicago truncatula
Medtr7g006450 10.0kb downstream 10.0kb downstream 10000 false chr7: 703922-713921 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304884 5265 Fabidae View MSA
124066090 5270 Rosid View MSA
123749882 5271 Pentapetalae View MSA
122789988 5272 Eudicot View MSA
122047618 5273 Angiosperm View MSA
121344832 5274 Embryophyte View MSA
123424388 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.128     High High
cufflinks 0.106       Low
cufflinks 0.364        
cufflinks 0.297        
cufflinks 6.141       High
cufflinks 0.093     Low Low
cufflinks 0.52        
cufflinks 1.897        
cufflinks 0.92        

0 Strain