Gene : Medtr7g076230 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR19858 - WD40 REPEAT PROTEIN Description:  periodic tryptophan protein
Genomic Order:  3276 Name:  ? Medtr7g076230
Secondary Identifier:  ? PAC:31079522
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g076230 0.5kb upstream 0.5kb upstream 7346 true chr7: 28673790-28681135 Medicago truncatula
Medtr7g076230 0.5kb upstream 0.5kb upstream 500 false chr7: 28673790-28674289 Medicago truncatula
Medtr7g076230 0.5kb downstream 0.5kb downstream 7346 true chr7: 28674290-28681635 Medicago truncatula
Medtr7g076230 0.5kb downstream 0.5kb downstream 500 false chr7: 28681136-28681635 Medicago truncatula
Medtr7g076230 1.0kb upstream 1.0kb upstream 7846 true chr7: 28673290-28681135 Medicago truncatula
Medtr7g076230 1.0kb upstream 1.0kb upstream 1000 false chr7: 28673290-28674289 Medicago truncatula
Medtr7g076230 1.0kb downstream 1.0kb downstream 7846 true chr7: 28674290-28682135 Medicago truncatula
Medtr7g076230 1.0kb downstream 1.0kb downstream 1000 false chr7: 28681136-28682135 Medicago truncatula
Medtr7g076230 2.0kb upstream 2.0kb upstream 8846 true chr7: 28672290-28681135 Medicago truncatula
Medtr7g076230 2.0kb upstream 2.0kb upstream 2000 false chr7: 28672290-28674289 Medicago truncatula
Medtr7g076230 2.0kb downstream 2.0kb downstream 8846 true chr7: 28674290-28683135 Medicago truncatula
Medtr7g076230 2.0kb downstream 2.0kb downstream 2000 false chr7: 28681136-28683135 Medicago truncatula
Medtr7g076230 5.0kb upstream 5.0kb upstream 11846 true chr7: 28669290-28681135 Medicago truncatula
Medtr7g076230 5.0kb upstream 5.0kb upstream 5000 false chr7: 28669290-28674289 Medicago truncatula
Medtr7g076230 5.0kb downstream 5.0kb downstream 11846 true chr7: 28674290-28686135 Medicago truncatula
Medtr7g076230 5.0kb downstream 5.0kb downstream 5000 false chr7: 28681136-28686135 Medicago truncatula
Medtr7g076230 10.0kb upstream 10.0kb upstream 16846 true chr7: 28664290-28681135 Medicago truncatula
Medtr7g076230 10.0kb upstream 10.0kb upstream 10000 false chr7: 28664290-28674289 Medicago truncatula
Medtr7g076230 10.0kb downstream 10.0kb downstream 16846 true chr7: 28674290-28691135 Medicago truncatula
Medtr7g076230 10.0kb downstream 10.0kb downstream 10000 false chr7: 28681136-28691135 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301197 5265 Fabidae View MSA
124068186 5270 Rosid View MSA
123748655 5271 Pentapetalae View MSA
122789333 5272 Eudicot View MSA
122043279 5273 Angiosperm View MSA
121345886 5274 Embryophyte View MSA
123424187 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.979        
cufflinks 2.693        
cufflinks 2.578        
cufflinks 0.871       Low
cufflinks 4.583       High
cufflinks 0.591       Low
cufflinks 1.411        
cufflinks 2.851        
cufflinks 1.975        

0 Strain