Gene : Medtr7g098270 M. truncatula Mt4.0v1
Defline:  (1 of 10) KOG4293 - Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains Description:  auxin-responsive family protein
Genomic Order:  4817 Name:  ? Medtr7g098270
Secondary Identifier:  ? PAC:31082215
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g098270 0.5kb upstream 0.5kb upstream 2592 true chr7: 39322760-39325351 Medicago truncatula
Medtr7g098270 0.5kb upstream 0.5kb upstream 500 false chr7: 39324852-39325351 Medicago truncatula
Medtr7g098270 0.5kb downstream 0.5kb downstream 2592 true chr7: 39322260-39324851 Medicago truncatula
Medtr7g098270 0.5kb downstream 0.5kb downstream 500 false chr7: 39322260-39322759 Medicago truncatula
Medtr7g098270 1.0kb upstream 1.0kb upstream 3092 true chr7: 39322760-39325851 Medicago truncatula
Medtr7g098270 1.0kb upstream 1.0kb upstream 1000 false chr7: 39324852-39325851 Medicago truncatula
Medtr7g098270 1.0kb downstream 1.0kb downstream 3092 true chr7: 39321760-39324851 Medicago truncatula
Medtr7g098270 1.0kb downstream 1.0kb downstream 1000 false chr7: 39321760-39322759 Medicago truncatula
Medtr7g098270 2.0kb upstream 2.0kb upstream 4092 true chr7: 39322760-39326851 Medicago truncatula
Medtr7g098270 2.0kb upstream 2.0kb upstream 2000 false chr7: 39324852-39326851 Medicago truncatula
Medtr7g098270 2.0kb downstream 2.0kb downstream 4092 true chr7: 39320760-39324851 Medicago truncatula
Medtr7g098270 2.0kb downstream 2.0kb downstream 2000 false chr7: 39320760-39322759 Medicago truncatula
Medtr7g098270 5.0kb upstream 5.0kb upstream 7092 true chr7: 39322760-39329851 Medicago truncatula
Medtr7g098270 5.0kb upstream 5.0kb upstream 5000 false chr7: 39324852-39329851 Medicago truncatula
Medtr7g098270 5.0kb downstream 5.0kb downstream 7092 true chr7: 39317760-39324851 Medicago truncatula
Medtr7g098270 5.0kb downstream 5.0kb downstream 5000 false chr7: 39317760-39322759 Medicago truncatula
Medtr7g098270 10.0kb upstream 10.0kb upstream 12092 true chr7: 39322760-39334851 Medicago truncatula
Medtr7g098270 10.0kb upstream 10.0kb upstream 10000 false chr7: 39324852-39334851 Medicago truncatula
Medtr7g098270 10.0kb downstream 10.0kb downstream 12092 true chr7: 39312760-39324851 Medicago truncatula
Medtr7g098270 10.0kb downstream 10.0kb downstream 10000 false chr7: 39312760-39322759 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295524 5265 Fabidae View MSA
124069237 5270 Rosid View MSA
123742900 5271 Pentapetalae View MSA
122770434 5272 Eudicot View MSA
122050143 5273 Angiosperm View MSA
121311761 5274 Embryophyte View MSA
123349016 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.03     Low  
cufflinks 0.006     Low Low
cufflinks 0.044     Low High
cufflinks 0.022     Low  
cufflinks 0.049     Low High
cufflinks 0.029     Low  
cufflinks 0.013     Low  
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain