Gene : Medtr7g099390 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR34549:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED Description:  photosystem I reaction center subunit IV A
Genomic Order:  4897 Name:  ? Medtr7g099390
Secondary Identifier:  ? PAC:31077398
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g099390 0.5kb upstream 0.5kb upstream 1836 true chr7: 39852234-39854069 Medicago truncatula
Medtr7g099390 0.5kb upstream 0.5kb upstream 500 false chr7: 39853570-39854069 Medicago truncatula
Medtr7g099390 0.5kb downstream 0.5kb downstream 1836 true chr7: 39851734-39853569 Medicago truncatula
Medtr7g099390 0.5kb downstream 0.5kb downstream 500 false chr7: 39851734-39852233 Medicago truncatula
Medtr7g099390 1.0kb upstream 1.0kb upstream 2336 true chr7: 39852234-39854569 Medicago truncatula
Medtr7g099390 1.0kb upstream 1.0kb upstream 1000 false chr7: 39853570-39854569 Medicago truncatula
Medtr7g099390 1.0kb downstream 1.0kb downstream 2336 true chr7: 39851234-39853569 Medicago truncatula
Medtr7g099390 1.0kb downstream 1.0kb downstream 1000 false chr7: 39851234-39852233 Medicago truncatula
Medtr7g099390 2.0kb upstream 2.0kb upstream 3336 true chr7: 39852234-39855569 Medicago truncatula
Medtr7g099390 2.0kb upstream 2.0kb upstream 2000 false chr7: 39853570-39855569 Medicago truncatula
Medtr7g099390 2.0kb downstream 2.0kb downstream 3336 true chr7: 39850234-39853569 Medicago truncatula
Medtr7g099390 2.0kb downstream 2.0kb downstream 2000 false chr7: 39850234-39852233 Medicago truncatula
Medtr7g099390 5.0kb upstream 5.0kb upstream 6336 true chr7: 39852234-39858569 Medicago truncatula
Medtr7g099390 5.0kb upstream 5.0kb upstream 5000 false chr7: 39853570-39858569 Medicago truncatula
Medtr7g099390 5.0kb downstream 5.0kb downstream 6336 true chr7: 39847234-39853569 Medicago truncatula
Medtr7g099390 5.0kb downstream 5.0kb downstream 5000 false chr7: 39847234-39852233 Medicago truncatula
Medtr7g099390 10.0kb upstream 10.0kb upstream 11336 true chr7: 39852234-39863569 Medicago truncatula
Medtr7g099390 10.0kb upstream 10.0kb upstream 10000 false chr7: 39853570-39863569 Medicago truncatula
Medtr7g099390 10.0kb downstream 10.0kb downstream 11336 true chr7: 39842234-39853569 Medicago truncatula
Medtr7g099390 10.0kb downstream 10.0kb downstream 10000 false chr7: 39842234-39852233 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122294808 5265 Fabidae View MSA
124068589 5270 Rosid View MSA
123747276 5271 Pentapetalae View MSA
122791001 5272 Eudicot View MSA
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.293        
cufflinks 274.76     High High
cufflinks 252.065     High  
cufflinks 2.538        
cufflinks 321.591     High High
cufflinks 7.589        
cufflinks 3.794        
cufflinks 294.444     High High
cufflinks 1.183       Low

0 Strain