Gene : Medtr7g099200 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR33271:SF3 - CUPIN DOMAIN-CONTAINING PROTEIN Description:  RmlC-like cupins superfamily protein
Genomic Order:  4883 Name:  ? Medtr7g099200
Secondary Identifier:  ? PAC:31079121
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g099200 0.5kb upstream 0.5kb upstream 1114 true chr7: 39755266-39756379 Medicago truncatula
Medtr7g099200 0.5kb upstream 0.5kb upstream 500 false chr7: 39755266-39755765 Medicago truncatula
Medtr7g099200 0.5kb downstream 0.5kb downstream 1114 true chr7: 39755766-39756879 Medicago truncatula
Medtr7g099200 0.5kb downstream 0.5kb downstream 500 false chr7: 39756380-39756879 Medicago truncatula
Medtr7g099200 1.0kb upstream 1.0kb upstream 1614 true chr7: 39754766-39756379 Medicago truncatula
Medtr7g099200 1.0kb upstream 1.0kb upstream 1000 false chr7: 39754766-39755765 Medicago truncatula
Medtr7g099200 1.0kb downstream 1.0kb downstream 1614 true chr7: 39755766-39757379 Medicago truncatula
Medtr7g099200 1.0kb downstream 1.0kb downstream 1000 false chr7: 39756380-39757379 Medicago truncatula
Medtr7g099200 2.0kb upstream 2.0kb upstream 2614 true chr7: 39753766-39756379 Medicago truncatula
Medtr7g099200 2.0kb upstream 2.0kb upstream 2000 false chr7: 39753766-39755765 Medicago truncatula
Medtr7g099200 2.0kb downstream 2.0kb downstream 2614 true chr7: 39755766-39758379 Medicago truncatula
Medtr7g099200 2.0kb downstream 2.0kb downstream 2000 false chr7: 39756380-39758379 Medicago truncatula
Medtr7g099200 5.0kb upstream 5.0kb upstream 5614 true chr7: 39750766-39756379 Medicago truncatula
Medtr7g099200 5.0kb upstream 5.0kb upstream 5000 false chr7: 39750766-39755765 Medicago truncatula
Medtr7g099200 5.0kb downstream 5.0kb downstream 5614 true chr7: 39755766-39761379 Medicago truncatula
Medtr7g099200 5.0kb downstream 5.0kb downstream 5000 false chr7: 39756380-39761379 Medicago truncatula
Medtr7g099200 10.0kb upstream 10.0kb upstream 10614 true chr7: 39745766-39756379 Medicago truncatula
Medtr7g099200 10.0kb upstream 10.0kb upstream 10000 false chr7: 39745766-39755765 Medicago truncatula
Medtr7g099200 10.0kb downstream 10.0kb downstream 10614 true chr7: 39755766-39766379 Medicago truncatula
Medtr7g099200 10.0kb downstream 10.0kb downstream 10000 false chr7: 39756380-39766379 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315039 5265 Fabidae View MSA
124060878 5270 Rosid View MSA
123742997 5271 Pentapetalae View MSA
122793157 5272 Eudicot View MSA
122044635 5273 Angiosperm View MSA
121350768 5274 Embryophyte View MSA
123425697 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.712       Low
cufflinks 11.559     High  
cufflinks 37.142     High High
cufflinks 10.451     High  
cufflinks 15.852     High  
cufflinks 31.887     High High
cufflinks 30.673     High High
cufflinks 21.69     High  
cufflinks 10.9     High  

0 Strain