Gene : Medtr7g100328 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR26312:SF76 - TETRATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN Description:  TPR superfamily protein
Genomic Order:  4946 Name:  ? Medtr7g100328
Secondary Identifier:  ? PAC:31080361
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g100328 0.5kb upstream 0.5kb upstream 1840 true chr7: 40270517-40272356 Medicago truncatula
Medtr7g100328 0.5kb upstream 0.5kb upstream 500 false chr7: 40270517-40271016 Medicago truncatula
Medtr7g100328 0.5kb downstream 0.5kb downstream 1840 true chr7: 40271017-40272856 Medicago truncatula
Medtr7g100328 0.5kb downstream 0.5kb downstream 500 false chr7: 40272357-40272856 Medicago truncatula
Medtr7g100328 1.0kb upstream 1.0kb upstream 2340 true chr7: 40270017-40272356 Medicago truncatula
Medtr7g100328 1.0kb upstream 1.0kb upstream 1000 false chr7: 40270017-40271016 Medicago truncatula
Medtr7g100328 1.0kb downstream 1.0kb downstream 2340 true chr7: 40271017-40273356 Medicago truncatula
Medtr7g100328 1.0kb downstream 1.0kb downstream 1000 false chr7: 40272357-40273356 Medicago truncatula
Medtr7g100328 2.0kb upstream 2.0kb upstream 3340 true chr7: 40269017-40272356 Medicago truncatula
Medtr7g100328 2.0kb upstream 2.0kb upstream 2000 false chr7: 40269017-40271016 Medicago truncatula
Medtr7g100328 2.0kb downstream 2.0kb downstream 3340 true chr7: 40271017-40274356 Medicago truncatula
Medtr7g100328 2.0kb downstream 2.0kb downstream 2000 false chr7: 40272357-40274356 Medicago truncatula
Medtr7g100328 5.0kb upstream 5.0kb upstream 6340 true chr7: 40266017-40272356 Medicago truncatula
Medtr7g100328 5.0kb upstream 5.0kb upstream 5000 false chr7: 40266017-40271016 Medicago truncatula
Medtr7g100328 5.0kb downstream 5.0kb downstream 6340 true chr7: 40271017-40277356 Medicago truncatula
Medtr7g100328 5.0kb downstream 5.0kb downstream 5000 false chr7: 40272357-40277356 Medicago truncatula
Medtr7g100328 10.0kb upstream 10.0kb upstream 11340 true chr7: 40261017-40272356 Medicago truncatula
Medtr7g100328 10.0kb upstream 10.0kb upstream 10000 false chr7: 40261017-40271016 Medicago truncatula
Medtr7g100328 10.0kb downstream 10.0kb downstream 11340 true chr7: 40271017-40282356 Medicago truncatula
Medtr7g100328 10.0kb downstream 10.0kb downstream 10000 false chr7: 40272357-40282356 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299191 5265 Fabidae View MSA
124062008 5270 Rosid View MSA
123737830 5271 Pentapetalae View MSA
122791127 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.915        
cufflinks 22.827     High High
cufflinks 16.189     High  
cufflinks 4.113        
cufflinks 35.747     High High
cufflinks 2.246       Low
cufflinks 2.744       Low
cufflinks 18.123     High  
cufflinks 4.167        

0 Strain