Gene : Medtr7g100260 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12381 - RIBONUCLEOPROTEIN Description:  hypothetical protein
Genomic Order:  4953 Name:  ? Medtr7g100260
Secondary Identifier:  ? PAC:31081006
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g100260 0.5kb upstream 0.5kb upstream 3033 true chr7: 40316259-40319291 Medicago truncatula
Medtr7g100260 0.5kb upstream 0.5kb upstream 500 false chr7: 40316259-40316758 Medicago truncatula
Medtr7g100260 0.5kb downstream 0.5kb downstream 3033 true chr7: 40316759-40319791 Medicago truncatula
Medtr7g100260 0.5kb downstream 0.5kb downstream 500 false chr7: 40319292-40319791 Medicago truncatula
Medtr7g100260 1.0kb upstream 1.0kb upstream 3533 true chr7: 40315759-40319291 Medicago truncatula
Medtr7g100260 1.0kb upstream 1.0kb upstream 1000 false chr7: 40315759-40316758 Medicago truncatula
Medtr7g100260 1.0kb downstream 1.0kb downstream 3533 true chr7: 40316759-40320291 Medicago truncatula
Medtr7g100260 1.0kb downstream 1.0kb downstream 1000 false chr7: 40319292-40320291 Medicago truncatula
Medtr7g100260 2.0kb upstream 2.0kb upstream 4533 true chr7: 40314759-40319291 Medicago truncatula
Medtr7g100260 2.0kb upstream 2.0kb upstream 2000 false chr7: 40314759-40316758 Medicago truncatula
Medtr7g100260 2.0kb downstream 2.0kb downstream 4533 true chr7: 40316759-40321291 Medicago truncatula
Medtr7g100260 2.0kb downstream 2.0kb downstream 2000 false chr7: 40319292-40321291 Medicago truncatula
Medtr7g100260 5.0kb upstream 5.0kb upstream 7533 true chr7: 40311759-40319291 Medicago truncatula
Medtr7g100260 5.0kb upstream 5.0kb upstream 5000 false chr7: 40311759-40316758 Medicago truncatula
Medtr7g100260 5.0kb downstream 5.0kb downstream 7533 true chr7: 40316759-40324291 Medicago truncatula
Medtr7g100260 5.0kb downstream 5.0kb downstream 5000 false chr7: 40319292-40324291 Medicago truncatula
Medtr7g100260 10.0kb upstream 10.0kb upstream 12533 true chr7: 40306759-40319291 Medicago truncatula
Medtr7g100260 10.0kb upstream 10.0kb upstream 10000 false chr7: 40306759-40316758 Medicago truncatula
Medtr7g100260 10.0kb downstream 10.0kb downstream 12533 true chr7: 40316759-40329291 Medicago truncatula
Medtr7g100260 10.0kb downstream 10.0kb downstream 10000 false chr7: 40319292-40329291 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308646 5265 Fabidae View MSA
124060926 5270 Rosid View MSA
123742153 5271 Pentapetalae View MSA
122787533 5272 Eudicot View MSA
122051388 5273 Angiosperm View MSA
121344836 5274 Embryophyte View MSA
123428142 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.114     High High
cufflinks 27.136     High  
cufflinks 28.747     High  
cufflinks 24.702     High  
cufflinks 37.655     High  
cufflinks 9.49       Low
cufflinks 19.532     High  
cufflinks 25.921     High  
cufflinks 19.371     High  

0 Strain