Gene : Medtr7g099940 M. truncatula Mt4.0v1
Defline:  (1 of 243) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Description:  RNA-binding (RRM/RBD/RNP motif) family protein
Genomic Order:  4929 Name:  ? Medtr7g099940
Secondary Identifier:  ? PAC:31082115
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g099940 0.5kb upstream 0.5kb upstream 2994 true chr7: 40168282-40171275 Medicago truncatula
Medtr7g099940 0.5kb upstream 0.5kb upstream 500 false chr7: 40168282-40168781 Medicago truncatula
Medtr7g099940 0.5kb downstream 0.5kb downstream 2994 true chr7: 40168782-40171775 Medicago truncatula
Medtr7g099940 0.5kb downstream 0.5kb downstream 500 false chr7: 40171276-40171775 Medicago truncatula
Medtr7g099940 1.0kb upstream 1.0kb upstream 3494 true chr7: 40167782-40171275 Medicago truncatula
Medtr7g099940 1.0kb upstream 1.0kb upstream 1000 false chr7: 40167782-40168781 Medicago truncatula
Medtr7g099940 1.0kb downstream 1.0kb downstream 3494 true chr7: 40168782-40172275 Medicago truncatula
Medtr7g099940 1.0kb downstream 1.0kb downstream 1000 false chr7: 40171276-40172275 Medicago truncatula
Medtr7g099940 2.0kb upstream 2.0kb upstream 4494 true chr7: 40166782-40171275 Medicago truncatula
Medtr7g099940 2.0kb upstream 2.0kb upstream 2000 false chr7: 40166782-40168781 Medicago truncatula
Medtr7g099940 2.0kb downstream 2.0kb downstream 4494 true chr7: 40168782-40173275 Medicago truncatula
Medtr7g099940 2.0kb downstream 2.0kb downstream 2000 false chr7: 40171276-40173275 Medicago truncatula
Medtr7g099940 5.0kb upstream 5.0kb upstream 7494 true chr7: 40163782-40171275 Medicago truncatula
Medtr7g099940 5.0kb upstream 5.0kb upstream 5000 false chr7: 40163782-40168781 Medicago truncatula
Medtr7g099940 5.0kb downstream 5.0kb downstream 7494 true chr7: 40168782-40176275 Medicago truncatula
Medtr7g099940 5.0kb downstream 5.0kb downstream 5000 false chr7: 40171276-40176275 Medicago truncatula
Medtr7g099940 10.0kb upstream 10.0kb upstream 12494 true chr7: 40158782-40171275 Medicago truncatula
Medtr7g099940 10.0kb upstream 10.0kb upstream 10000 false chr7: 40158782-40168781 Medicago truncatula
Medtr7g099940 10.0kb downstream 10.0kb downstream 12494 true chr7: 40168782-40181275 Medicago truncatula
Medtr7g099940 10.0kb downstream 10.0kb downstream 10000 false chr7: 40171276-40181275 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305005 5265 Fabidae View MSA
124065656 5270 Rosid View MSA
123746310 5271 Pentapetalae View MSA
122791948 5272 Eudicot View MSA
122051373 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349952 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.705        
cufflinks 2.802        
cufflinks 1.585        
cufflinks 1.534        
cufflinks 6.787       High
cufflinks 1.025       Low
cufflinks 1.381        
cufflinks 1.981        
cufflinks 2.244        

0 Strain