Gene : Medtr7g100550 M. truncatula Mt4.0v1
Defline:  (1 of 599) PF13041 - PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  4983 Name:  ? Medtr7g100550
Secondary Identifier:  ? PAC:31078924
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g100550 0.5kb upstream 0.5kb upstream 7727 true chr7: 40485311-40493037 Medicago truncatula
Medtr7g100550 0.5kb upstream 0.5kb upstream 500 false chr7: 40492538-40493037 Medicago truncatula
Medtr7g100550 0.5kb downstream 0.5kb downstream 7727 true chr7: 40484811-40492537 Medicago truncatula
Medtr7g100550 0.5kb downstream 0.5kb downstream 500 false chr7: 40484811-40485310 Medicago truncatula
Medtr7g100550 1.0kb upstream 1.0kb upstream 8227 true chr7: 40485311-40493537 Medicago truncatula
Medtr7g100550 1.0kb upstream 1.0kb upstream 1000 false chr7: 40492538-40493537 Medicago truncatula
Medtr7g100550 1.0kb downstream 1.0kb downstream 8227 true chr7: 40484311-40492537 Medicago truncatula
Medtr7g100550 1.0kb downstream 1.0kb downstream 1000 false chr7: 40484311-40485310 Medicago truncatula
Medtr7g100550 2.0kb upstream 2.0kb upstream 9227 true chr7: 40485311-40494537 Medicago truncatula
Medtr7g100550 2.0kb upstream 2.0kb upstream 2000 false chr7: 40492538-40494537 Medicago truncatula
Medtr7g100550 2.0kb downstream 2.0kb downstream 9227 true chr7: 40483311-40492537 Medicago truncatula
Medtr7g100550 2.0kb downstream 2.0kb downstream 2000 false chr7: 40483311-40485310 Medicago truncatula
Medtr7g100550 5.0kb upstream 5.0kb upstream 12227 true chr7: 40485311-40497537 Medicago truncatula
Medtr7g100550 5.0kb upstream 5.0kb upstream 5000 false chr7: 40492538-40497537 Medicago truncatula
Medtr7g100550 5.0kb downstream 5.0kb downstream 12227 true chr7: 40480311-40492537 Medicago truncatula
Medtr7g100550 5.0kb downstream 5.0kb downstream 5000 false chr7: 40480311-40485310 Medicago truncatula
Medtr7g100550 10.0kb upstream 10.0kb upstream 17227 true chr7: 40485311-40502537 Medicago truncatula
Medtr7g100550 10.0kb upstream 10.0kb upstream 10000 false chr7: 40492538-40502537 Medicago truncatula
Medtr7g100550 10.0kb downstream 10.0kb downstream 17227 true chr7: 40475311-40492537 Medicago truncatula
Medtr7g100550 10.0kb downstream 10.0kb downstream 10000 false chr7: 40475311-40485310 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302518 5265 Fabidae View MSA
124068015 5270 Rosid View MSA
123738487 5271 Pentapetalae View MSA
122789712 5272 Eudicot View MSA
122044126 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121347187 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.431        
cufflinks 4.739        
cufflinks 4.477        
cufflinks 0.072       Low
cufflinks 7.362       High
cufflinks 0.191        
cufflinks 0.174        
cufflinks 4.828        
cufflinks 0.183        

0 Strain