Gene : Medtr7g100370 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR12181:SF12 - PROTEIN LPIN-1 Description:  phosphatidate phosphatase LPIN3-like protein
Genomic Order:  4968 Name:  ? Medtr7g100370
Secondary Identifier:  ? PAC:31083276
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRIGLSYN-PWY Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g100370 0.5kb upstream 0.5kb upstream 6259 true chr7: 40409180-40415438 Medicago truncatula
Medtr7g100370 0.5kb upstream 0.5kb upstream 500 false chr7: 40409180-40409679 Medicago truncatula
Medtr7g100370 0.5kb downstream 0.5kb downstream 6259 true chr7: 40409680-40415938 Medicago truncatula
Medtr7g100370 0.5kb downstream 0.5kb downstream 500 false chr7: 40415439-40415938 Medicago truncatula
Medtr7g100370 1.0kb upstream 1.0kb upstream 6759 true chr7: 40408680-40415438 Medicago truncatula
Medtr7g100370 1.0kb upstream 1.0kb upstream 1000 false chr7: 40408680-40409679 Medicago truncatula
Medtr7g100370 1.0kb downstream 1.0kb downstream 6759 true chr7: 40409680-40416438 Medicago truncatula
Medtr7g100370 1.0kb downstream 1.0kb downstream 1000 false chr7: 40415439-40416438 Medicago truncatula
Medtr7g100370 2.0kb upstream 2.0kb upstream 7759 true chr7: 40407680-40415438 Medicago truncatula
Medtr7g100370 2.0kb upstream 2.0kb upstream 2000 false chr7: 40407680-40409679 Medicago truncatula
Medtr7g100370 2.0kb downstream 2.0kb downstream 7759 true chr7: 40409680-40417438 Medicago truncatula
Medtr7g100370 2.0kb downstream 2.0kb downstream 2000 false chr7: 40415439-40417438 Medicago truncatula
Medtr7g100370 5.0kb upstream 5.0kb upstream 10759 true chr7: 40404680-40415438 Medicago truncatula
Medtr7g100370 5.0kb upstream 5.0kb upstream 5000 false chr7: 40404680-40409679 Medicago truncatula
Medtr7g100370 5.0kb downstream 5.0kb downstream 10759 true chr7: 40409680-40420438 Medicago truncatula
Medtr7g100370 5.0kb downstream 5.0kb downstream 5000 false chr7: 40415439-40420438 Medicago truncatula
Medtr7g100370 10.0kb upstream 10.0kb upstream 15759 true chr7: 40399680-40415438 Medicago truncatula
Medtr7g100370 10.0kb upstream 10.0kb upstream 10000 false chr7: 40399680-40409679 Medicago truncatula
Medtr7g100370 10.0kb downstream 10.0kb downstream 15759 true chr7: 40409680-40425438 Medicago truncatula
Medtr7g100370 10.0kb downstream 10.0kb downstream 10000 false chr7: 40415439-40425438 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311900 5265 Fabidae View MSA
124065604 5270 Rosid View MSA
123741487 5271 Pentapetalae View MSA
122792824 5272 Eudicot View MSA
122048354 5273 Angiosperm View MSA
121350822 5274 Embryophyte View MSA
123381897 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.878       Low
cufflinks 3.388        
cufflinks 3.533       High
cufflinks 0.934       Low
cufflinks 3.116        
cufflinks 1.224        
cufflinks 2.798        
cufflinks 2.772        
cufflinks 1.86        

0 Strain