Gene : Medtr7g101080 M. truncatula Mt4.0v1
Defline:  (1 of 14) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Description:  fasciclin-like arabinogalactan protein
Genomic Order:  5022 Name:  ? Medtr7g101080
Secondary Identifier:  ? PAC:31081103
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g101080 0.5kb upstream 0.5kb upstream 1539 true chr7: 40782599-40784137 Medicago truncatula
Medtr7g101080 0.5kb upstream 0.5kb upstream 500 false chr7: 40783638-40784137 Medicago truncatula
Medtr7g101080 0.5kb downstream 0.5kb downstream 1539 true chr7: 40782099-40783637 Medicago truncatula
Medtr7g101080 0.5kb downstream 0.5kb downstream 500 false chr7: 40782099-40782598 Medicago truncatula
Medtr7g101080 1.0kb upstream 1.0kb upstream 2039 true chr7: 40782599-40784637 Medicago truncatula
Medtr7g101080 1.0kb upstream 1.0kb upstream 1000 false chr7: 40783638-40784637 Medicago truncatula
Medtr7g101080 1.0kb downstream 1.0kb downstream 2039 true chr7: 40781599-40783637 Medicago truncatula
Medtr7g101080 1.0kb downstream 1.0kb downstream 1000 false chr7: 40781599-40782598 Medicago truncatula
Medtr7g101080 2.0kb upstream 2.0kb upstream 3039 true chr7: 40782599-40785637 Medicago truncatula
Medtr7g101080 2.0kb upstream 2.0kb upstream 2000 false chr7: 40783638-40785637 Medicago truncatula
Medtr7g101080 2.0kb downstream 2.0kb downstream 3039 true chr7: 40780599-40783637 Medicago truncatula
Medtr7g101080 2.0kb downstream 2.0kb downstream 2000 false chr7: 40780599-40782598 Medicago truncatula
Medtr7g101080 5.0kb upstream 5.0kb upstream 6039 true chr7: 40782599-40788637 Medicago truncatula
Medtr7g101080 5.0kb upstream 5.0kb upstream 5000 false chr7: 40783638-40788637 Medicago truncatula
Medtr7g101080 5.0kb downstream 5.0kb downstream 6039 true chr7: 40777599-40783637 Medicago truncatula
Medtr7g101080 5.0kb downstream 5.0kb downstream 5000 false chr7: 40777599-40782598 Medicago truncatula
Medtr7g101080 10.0kb upstream 10.0kb upstream 11039 true chr7: 40782599-40793637 Medicago truncatula
Medtr7g101080 10.0kb upstream 10.0kb upstream 10000 false chr7: 40783638-40793637 Medicago truncatula
Medtr7g101080 10.0kb downstream 10.0kb downstream 11039 true chr7: 40772599-40783637 Medicago truncatula
Medtr7g101080 10.0kb downstream 10.0kb downstream 10000 false chr7: 40772599-40782598 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309641 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.127       Low
cufflinks 26.487     High  
cufflinks 14.797     High  
cufflinks 29.278     High  
cufflinks 60.989     High  
cufflinks 7.959        
cufflinks 14.553     High  
cufflinks 21.011     High  
cufflinks 23.846     High  

0 Strain