Gene : Medtr7g101870 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D Description:  ATPase, AAA-type, CDC48 protein
Genomic Order:  5061 Name:  ? Medtr7g101870
Secondary Identifier:  ? PAC:31083513
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g101870 0.5kb upstream 0.5kb upstream 4938 true chr7: 41090557-41095494 Medicago truncatula
Medtr7g101870 0.5kb upstream 0.5kb upstream 500 false chr7: 41094995-41095494 Medicago truncatula
Medtr7g101870 0.5kb downstream 0.5kb downstream 4938 true chr7: 41090057-41094994 Medicago truncatula
Medtr7g101870 0.5kb downstream 0.5kb downstream 500 false chr7: 41090057-41090556 Medicago truncatula
Medtr7g101870 1.0kb upstream 1.0kb upstream 5438 true chr7: 41090557-41095994 Medicago truncatula
Medtr7g101870 1.0kb upstream 1.0kb upstream 1000 false chr7: 41094995-41095994 Medicago truncatula
Medtr7g101870 1.0kb downstream 1.0kb downstream 5438 true chr7: 41089557-41094994 Medicago truncatula
Medtr7g101870 1.0kb downstream 1.0kb downstream 1000 false chr7: 41089557-41090556 Medicago truncatula
Medtr7g101870 2.0kb upstream 2.0kb upstream 6438 true chr7: 41090557-41096994 Medicago truncatula
Medtr7g101870 2.0kb upstream 2.0kb upstream 2000 false chr7: 41094995-41096994 Medicago truncatula
Medtr7g101870 2.0kb downstream 2.0kb downstream 6438 true chr7: 41088557-41094994 Medicago truncatula
Medtr7g101870 2.0kb downstream 2.0kb downstream 2000 false chr7: 41088557-41090556 Medicago truncatula
Medtr7g101870 5.0kb upstream 5.0kb upstream 9438 true chr7: 41090557-41099994 Medicago truncatula
Medtr7g101870 5.0kb upstream 5.0kb upstream 5000 false chr7: 41094995-41099994 Medicago truncatula
Medtr7g101870 5.0kb downstream 5.0kb downstream 9438 true chr7: 41085557-41094994 Medicago truncatula
Medtr7g101870 5.0kb downstream 5.0kb downstream 5000 false chr7: 41085557-41090556 Medicago truncatula
Medtr7g101870 10.0kb upstream 10.0kb upstream 14438 true chr7: 41090557-41104994 Medicago truncatula
Medtr7g101870 10.0kb upstream 10.0kb upstream 10000 false chr7: 41094995-41104994 Medicago truncatula
Medtr7g101870 10.0kb downstream 10.0kb downstream 14438 true chr7: 41080557-41094994 Medicago truncatula
Medtr7g101870 10.0kb downstream 10.0kb downstream 10000 false chr7: 41080557-41090556 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311654 5265 Fabidae View MSA
124066929 5270 Rosid View MSA
123746983 5271 Pentapetalae View MSA
122795799 5272 Eudicot View MSA
122048605 5273 Angiosperm View MSA
121347913 5274 Embryophyte View MSA
123424841 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 90.003     High High
cufflinks 34.599     High  
cufflinks 30.046     High  
cufflinks 49.85     High  
cufflinks 40.312     High  
cufflinks 19.856     High Low
cufflinks 43.825     High  
cufflinks 34.081     High  
cufflinks 76.081     High High

0 Strain