Gene : Medtr7g068780 M. truncatula Mt4.0v1
Defline:  (1 of 2) 1.14.99.33 - Delta(12)-fatty acid dehydrogenase / Linoleate Delta-12-fatty acid acetylenase (desaturase) Description:  temperature-sensitive omega-3 fatty acid desaturase
Genomic Order:  2815 Name:  ? Medtr7g068780
Secondary Identifier:  ? PAC:31080476
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6013 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g068780 0.5kb upstream 0.5kb upstream 4453 true chr7: 25265886-25270338 Medicago truncatula
Medtr7g068780 0.5kb upstream 0.5kb upstream 500 false chr7: 25269839-25270338 Medicago truncatula
Medtr7g068780 0.5kb downstream 0.5kb downstream 4453 true chr7: 25265386-25269838 Medicago truncatula
Medtr7g068780 0.5kb downstream 0.5kb downstream 500 false chr7: 25265386-25265885 Medicago truncatula
Medtr7g068780 1.0kb upstream 1.0kb upstream 4953 true chr7: 25265886-25270838 Medicago truncatula
Medtr7g068780 1.0kb upstream 1.0kb upstream 1000 false chr7: 25269839-25270838 Medicago truncatula
Medtr7g068780 1.0kb downstream 1.0kb downstream 4953 true chr7: 25264886-25269838 Medicago truncatula
Medtr7g068780 1.0kb downstream 1.0kb downstream 1000 false chr7: 25264886-25265885 Medicago truncatula
Medtr7g068780 2.0kb upstream 2.0kb upstream 5953 true chr7: 25265886-25271838 Medicago truncatula
Medtr7g068780 2.0kb upstream 2.0kb upstream 2000 false chr7: 25269839-25271838 Medicago truncatula
Medtr7g068780 2.0kb downstream 2.0kb downstream 5953 true chr7: 25263886-25269838 Medicago truncatula
Medtr7g068780 2.0kb downstream 2.0kb downstream 2000 false chr7: 25263886-25265885 Medicago truncatula
Medtr7g068780 5.0kb upstream 5.0kb upstream 8953 true chr7: 25265886-25274838 Medicago truncatula
Medtr7g068780 5.0kb upstream 5.0kb upstream 5000 false chr7: 25269839-25274838 Medicago truncatula
Medtr7g068780 5.0kb downstream 5.0kb downstream 8953 true chr7: 25260886-25269838 Medicago truncatula
Medtr7g068780 5.0kb downstream 5.0kb downstream 5000 false chr7: 25260886-25265885 Medicago truncatula
Medtr7g068780 10.0kb upstream 10.0kb upstream 13953 true chr7: 25265886-25279838 Medicago truncatula
Medtr7g068780 10.0kb upstream 10.0kb upstream 10000 false chr7: 25269839-25279838 Medicago truncatula
Medtr7g068780 10.0kb downstream 10.0kb downstream 13953 true chr7: 25255886-25269838 Medicago truncatula
Medtr7g068780 10.0kb downstream 10.0kb downstream 10000 false chr7: 25255886-25265885 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311667 5265 Fabidae View MSA
124069335 5270 Rosid View MSA
123752062 5271 Pentapetalae View MSA
122788316 5272 Eudicot View MSA
122045494 5273 Angiosperm View MSA
121344489 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.069     High  
cufflinks 27.275     High  
cufflinks 5.832        
cufflinks 5.388        
cufflinks 2.669       Low
cufflinks 16.058     High  
cufflinks 58.23     High High
cufflinks 8.806        
cufflinks 65.664     High High

0 Strain